Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq308 93.3 1e-13 >seq308 Length=372676 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Minus Query 199440 CCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAGA 199499 ||||||||| ||| || || | ||| || | ||| ||||| |||||||| |||||||||| Sbjct 102741 CCTTTTGGATGTTATAATCCGACAATGTACGTCCGTCTTCAAGCTGCTTGCCGGCGAAGA 102682 Query 199500 TGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC-ACGGAT 199558 | | ||| || || || || || |||||| || || || ||| |||| || | Sbjct 102681 TCAAACGTTGTTGATCTGGCGGGATACCTTCTTTATCTTGGAT-TTTGGCTTTGACATTT 102623 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 || | ||||| | | || || || | ||||| ||||| || || || || |||||| Sbjct 102622 TCAATAGTGTCGGAAGACTCAACCTCGAGAGTGATGGTCTTCCCTGTAAGGGTCTTCACA 102563 Query 199619 AAAATTTG 199626 |||||||| Sbjct 102562 AAAATTTG 102555 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178836453492679