Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq480 100 3e-16 >seq480 Length=246690 Score = 100 bits (110), Expect = 3e-16 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 154957 AGGTATATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGT 155016 |||| ||| | ||||| || || | |||||||| || ||| || || |||| Sbjct 47595 AGGTTTATTTAGATGGWGCTAACATGAATGCACAAGTTGGATTATGTCGTCCTGGTGATA 47654 Query 155017 ATGGTGCAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTG 155076 ||| |||||||||| |||| |||| |||||||| ||||| ||||| |||||||| || | Sbjct 47655 TTGGAGCAGATGTATCTCATTTAAATTTACATAAGACATTYTGTATACCACATGGCGGCG 47714 Query 155077 GAGGTCCTGGCGTAGGTCCTATAGGTGT 155104 |||||||||| | || || || | ||| Sbjct 47715 GAGGTCCTGGGATGGGACCAATTGTTGT 47742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579171987218080