Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq476 150 2e-31 >seq476 Length=239761 Score = 150 bits (166), Expect = 2e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 37198 CTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttt 37257 ||||||||||| |||| ||||| ||| ||||||||||||||||| |||||||| | Sbjct 226101 CTTCATCTCTAGAAATCAGCTCATTGCTAAAAGTTAATCCTGGCATTAATCCTCTTTTCT 226042 Query 37258 tAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATG 37317 | | |||||||| ||| |||||| |||||| || || |||||||| || || ||||||| Sbjct 226041 TCAACCAAAATAATGCAGCAAAACTTCCAGAGAAAAATATACCTTCCACAGCAGCAAATG 225982 Query 37318 CTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCTG 37377 | || | | | ||| ||||||| | |||| |||||||| | |||||||| Sbjct 225981 CAACTAACCTTTCACCAAAAGTTGCTTTGCTATCACTTATCCATTTAAGAGCCCAATCTG 225922 Query 37378 CCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGT 37425 |||| ||| |||||| || |||||||| || || || | ||||| Sbjct 225921 CCTTCTTTTTTACACATGGCATGGTTTCAATGGCATTAAATAAAAAGT 225874 Score = 132 bits (146), Expect = 6e-26 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 37446 ATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCTATCTGA 37505 ||||| |||||||||| ||| ||||||||||| || || ||||| || || ||| || Sbjct 225774 ATATATGTATCAATTAATAAGCTATACATTTCTGAATGTATATTCTCCATCATTATTTGG 225715 Query 37506 AAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTAGCTAAG 37565 || ||||||||||| ||||| |||| || |||||| || | | |||| | | | | | Sbjct 225714 AATCCATAAAAACATCTAGCCTCAGTTACTTGAACTTCTTGAGAAAATCGTTCAACAAGA 225655 Query 37566 TTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGT 37625 ||||||||||| || ||||| ||| ||||| || || | || | || |||||| Sbjct 225654 TTTTCATTAACAATGCCATCTGAAGCAGCAAAAAATGCTAATACGTGGGATACAAAATGA 225595 Query 37626 CTTTCATCATTTGATAATTTTTTCCAATCATTAATATC 37663 | |||||||| | ||| | ||||||||| || ||| Sbjct 225594 CGTTCATCATCAGTCAATCTAATCCAATCATCAAGATC 225557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592275063877480