Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq80 138 1e-26 >seq80 Length=763085 Score = 138 bits (152), Expect = 1e-26 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||||||||||| ||| | || || ||||| || |||||||| | ||| || Sbjct 679540 GCTTGGCCAGTTCGCCGGGCAACAAAAGYCGGACGGCCGTTTGGATCTCCCTACTGCTGA 679599 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| | |||||||| | || ||||| || | ||||||| || ||||||| |||| | Sbjct 679600 TCGTTCTACGCTTGTTGTACTGGGCCAGGCGACTGGCCTCGCTGGCGATGCGCTCGAAGA 679659 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||| ||| | ||| |||| ||| |||||||| Sbjct 679660 GGTCGTTGACGAAGCTGTTCATGATGCTCATTGCCTTCGACGAGACGCCGGTGTCGGGGT 679719 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||| || |||||||| ||||||||| Sbjct 679720 GCACTTGTTTGAGCACTTTGTAGATG 679745 Score = 111 bits (122), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| | || || ||||| || |||||||| || || | Sbjct 611365 GCTTGGCCAATTCACCGGGCAACAAGAGTCGGACGGCAGTTTGGATCTCCCGGCTGGTAA 611306 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| |||| || ||||| | || ||||| | ||||||| |||| || Sbjct 611305 TGGTCGAACGCTTGTTGTAGTGGGCAAGACGACTGGACTCGGCGGCGATGCGCTCGAACA 611246 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||| || |||||||| ||| | ||| || | ||| |||||| | Sbjct 611245 GATCGTTGACGAAACTGTTCATGATGCTCATGGCTTTGGATGACACGCCGGTGTCGGGAT 611186 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||| ||||| ||||||||||||||| Sbjct 611185 GCACTTGCTTCAGCACCTTGTAGATG 611160 Score = 111 bits (122), Expect = 2e-18 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| ||| ||| ||| | || || ||||| || |||||||| || || | Sbjct 673791 GCTTGGCCAATTCACCGGGCAACAAGAGTCGGACGGCAGTTTGGATCTCCCGGCTGGTAA 673732 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| |||| || ||||| | || ||||| | ||||||| |||| || Sbjct 673731 TGGTCGAACGCTTGTTGTAGTGGGCAAGACGACTGGACTCGGCGGCGATGCGCTCGAACA 673672 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||| || |||||||| ||| | ||| || | ||| |||||| | Sbjct 673671 GATCGTTGACGAAACTGTTCATGATGCTCATGGCTTTGGATGACACGCCGGTGTCGGGAT 673612 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||| ||||| ||||||||||||||| Sbjct 673611 GCACTTGCTTCAGCACCTTGTAGATG 673586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106676601381929