Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq308 122 8e-23 seq2933 96.9 3e-15 seq489 91.5 1e-13 >seq308 Length=372676 Score = 122 bits (134), Expect = 8e-23 Identities = 143/191 (75%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | || || || || || || || || || ||||| || || | || Sbjct 102552 ATGCAAATTTTTGTGAAGACCCTTACAGGGAAGACCATCACTCTCGAGGTTGAGTCTTCC 102611 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | |||| || ||| || |||||||| |||||||| || || || |||||| Sbjct 102612 GACACTATTGAAAATGTCAAAGCCAAAATCCAAGATAAAGAAGGTATCCCGCCAGATCAA 102671 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA-TGTCAGATTATAA 24882 |||||||||||||| ||||| || ||||| || || || ||| |||| |||||||| Sbjct 102672 CAACGTTTGATCTTCGCCGGCAAGCAGCTTGAAGA-CGGACGTACATTGTCGGATTATAA 102730 Query 24883 CATTCAAAAGG 24893 ||| ||||||| Sbjct 102731 CATCCAAAAGG 102741 >seq2933 Length=10010 Score = 96.9 bits (106), Expect = 3e-15 Identities = 92/118 (78%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 139121 TGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGAT 139180 |||||| |||| ||| | ||| | ||| |||||||| || ||||| | ||||| ||||| Sbjct 1613 TGTATTGTACAACTTCAGTACAAAGATTGCTACACTTAATTGTACCAAGATTTTTTTGAT 1672 Query 139181 TGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTG 139238 ||||||| ||||| |||||||| || | ||||||||| | |||||||| | ||| Sbjct 1673 TGCTTTTAGCATTACATGCATCTTTATACAACATATACGGCATACCAGTTTCAATTTG 1730 >seq489 Length=245457 Score = 91.5 bits (100), Expect = 1e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 24805 AGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAG 24864 ||| || || || ||||| ||||||||||| ||||| || ||||| || || ||| | | Sbjct 239696 AGGTATTCCACCTGATCAGCAACGTTTGATATTTGCTGGCAAACAACTTGAAGATGGGCG 239755 Query 24865 AAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGT 24912 | |||||||||| ||||||||||| ||||| || || |||||||| Sbjct 239756 TACTCTGTCAGATTACAACATTCAAAAAGAATCTACCCTCCACTTGGT 239803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449865899090360