Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq80 159 5e-33 seq898 111 2e-18 >seq80 Length=763085 Score = 159 bits (176), Expect = 5e-33 Identities = 181/240 (75%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 ||||| || |||||||| || || || |||||||||| |||||||||||||| ||| Sbjct 679503 TACTTTGTCACGGCCTTAGTGCCTTCGCTGACGGCGTGCTTGGCCAGTTCGCCGGGCAAC 679562 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC-G 1485590 | || || ||||| || |||||||| | ||| |||||| | |||||||| || | | Sbjct 679563 AAAAGYCGGACGGCCGTTTGGATCTCCCTACTGCTGATCGTTCTACGCTTGTT-GTACTG 679621 Query 1485591 CGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCAT 1485650 |||||||| | ||||||| || ||||||| |||| | ||||||||| || |||||| Sbjct 679622 GGCCAGGCGACTGGCCTCGCTGGCGATGCGCTCGAAGAGGTCGTTGACGAAGCTGTTCAT 679681 Query 1485651 GATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 ||| ||| | || |||| ||| |||||||||||| || |||||||| ||||| Sbjct 679682 GATGCTCATTGCCTTCGACGAGACGCCGGTGTCGGGGTGCACTTGTTTGAGCACTTTGTA 679741 Score = 138 bits (152), Expect = 2e-26 Identities = 175/241 (73%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || || ||||| || || |||||||||| |||||| ||| ||| ||| Sbjct 611404 TGTACTTGGTCACAGCTTTGGTGCCTTCACTGACGGCGTGCTTGGCCAATTCACCGGGCA 611345 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || || ||||| || |||||||| ||| || || || |||||||| | Sbjct 611344 ACAAGAGTCGGACGGCAGTTTGGATCTCCCGGCTGGTAATGGTCGAACGCTTGTTGTAGT 611285 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || || | || ||||| | ||||||| |||| || |||||||| || ||||| Sbjct 611284 GGGCAAGACGACTGGACTCGGCGGCGATGCGCTCGAACAGATCGTTGACGAAACTGTTCA 611225 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | |||| || | ||| |||||| ||||| ||||| |||||||||| Sbjct 611224 TGATGCTCATGGCTTTGGATGACACGCCGGTGTCGGGATGCACTTGCTTCAGCACCTTGT 611165 Query 1485710 A 1485710 | Sbjct 611164 A 611164 Score = 138 bits (152), Expect = 2e-26 Identities = 175/241 (73%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || || ||||| || || |||||||||| |||||| ||| ||| ||| Sbjct 673830 TGTACTTGGTCACAGCTTTGGTGCCTTCACTGACGGCGTGCTTGGCCAATTCACCGGGCA 673771 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | || || ||||| || |||||||| ||| || || || |||||||| | Sbjct 673770 ACAAGAGTCGGACGGCAGTTTGGATCTCCCGGCTGGTAATGGTCGAACGCTTGTTGTAGT 673711 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | || || || | || ||||| | ||||||| |||| || |||||||| || ||||| Sbjct 673710 GGGCAAGACGACTGGACTCGGCGGCGATGCGCTCGAACAGATCGTTGACGAAACTGTTCA 673651 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | |||| || | ||| |||||| ||||| ||||| |||||||||| Sbjct 673650 TGATGCTCATGGCTTTGGATGACACGCCGGTGTCGGGATGCACTTGCTTCAGCACCTTGT 673591 Query 1485710 A 1485710 | Sbjct 673590 A 673590 >seq898 Length=103992 Score = 111 bits (122), Expect = 2e-18 Identities = 170/243 (70%), Gaps = 0/243 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||||||||| || ||||| || || || ||||||||| |||||| ||| ||| ||| Sbjct 103683 TGTACTTGGTAACAGCCTTAGTTCCTTCACTGACGGCGTGTTTGGCCAATTCACCGGGCA 103742 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 | ||||| ||||||||||| || || || | || || |||||||| | Sbjct 103743 ACAAGAGGCGGACGGCGGTCTGAATTTCCCGRCTAGTAATGGTCGAACGCTTGTTGTAGT 103802 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||||||| | | |||| | ||||||| |||| || |||||||| || ||||| Sbjct 103803 GRGCCAGGCGACTAGATTCGGCGGCGATGCGCTCGAACAGATCGTTGACGAAACTGTTCA 103862 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | ||| |||| || ||||| ||||| || || | ||| |||| Sbjct 103863 TGATGCTCATKGCTTTCGACGAGACACCGGTATCGGGATGCACTTGTTTCAACACTTTGT 103922 Query 1485710 AAA 1485712 ||| Sbjct 103923 AAA 103925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915646766599643