Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq306 89.7 8e-13 seq1015 84.2 3e-11 >seq306 Length=365715 Score = 89.7 bits (98), Expect = 8e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 146132 AGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAG 146191 ||||||||| || ||||||||| | || |||||||| || || ||||| || ||| | | Sbjct 85449 AGGCATTCCCCCGGATCAACAACGTCTTATTTTTGCTGGCAAGCAATTGGAAGATGGTCG 85390 Query 146192 AACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAG 146251 || | | || || |||||||||||||| || || | || |||||| | || ||||| Sbjct 85389 CACACTCTCTGACTACAATATACAAAAAGAGTCTACACTTCACTTAGTACTTCGTTTAAG 85330 Query 146252 AGGAGGT 146258 ||| ||| Sbjct 85329 AGGTGGT 85323 >seq1015 Length=63577 Score = 84.2 bits (92), Expect = 3e-11 Identities = 100/135 (74%), Gaps = 3/135 (2%) Strand=Plus/Plus Query 2110 AATACCATAATGAATAAATTTTAATATATTATCAGTGATCAAGACATCTTTCTCTTCAAA 2169 ||||||||| || ||||| |||| || | | ||| || || | || ||| |||||||| Sbjct 49954 AATACCATAGTGTATAAAGGTTAAAATGTCACTAGTTATTAATATATTTTTTTCTTCAAA 50013 Query 2170 TAAAGGTAACCAAATATCATAAAACCATGTATCTAATTTTAAATCATAATGCTT---ATT 2226 ||| || ||||||||||| | ||||| || ||| ||||||| ||| | || ||| Sbjct 50014 TAATGGAAACCAAATATCTTTGAACCAATTACCTACATTTAAATTATATTTTTTATCATT 50073 Query 2227 TATATATTCAAATAT 2241 || ||||| | |||| Sbjct 50074 TAAATATTGAGATAT 50088 Score = 84.2 bits (92), Expect = 3e-11 Identities = 100/135 (74%), Gaps = 3/135 (2%) Strand=Plus/Minus Query 243477 ATATTTGAATATATAAAT---AAGCATTATGATTTAAAATTAGATACATGGTTTTATGAT 243533 |||| | ||||| ||||| || | ||| ||||||| ||| || ||||| | ||| Sbjct 50088 ATATCTCAATATTTAAATGATAAAAAATATAATTTAAATGTAGGTAATTGGTTCAAAGAT 50029 Query 243534 ATTTGGTTACCTTTATTTGAAGAGAAAGATGTCTTGATCACTGATAATATATTAAAATTT 243593 |||||||| || ||||||||||| ||| || | || || ||| | | || |||| ||| Sbjct 50028 ATTTGGTTTCCATTATTTGAAGAAAAAAATATATTAATAACTAGTGACATTTTAACCTTT 49969 Query 243594 ATTCATTATGGTATT 243608 || || ||||||||| Sbjct 49968 ATACACTATGGTATT 49954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786111004750040