Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq308 114 1e-20 seq489 100 2e-16 >seq308 Length=372676 Score = 114 bits (126), Expect = 1e-20 Identities = 142/192 (74%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 29599 TTTTGAATGTTATAATCCG-CAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATAT 29657 ||||| ||||||||||||| |||| || || || || || || ||||| || | || Sbjct 102739 TTTTGGATGTTATAATCCGACAAT-GTACGTCCGTCTTCAAGCTGCTTGCCGGCGAAGAT 102681 Query 29658 CAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTC 29717 ||| | ||| ||||| ||||| ||||| ||||| ||||| | ||| ||||||| |||| Sbjct 102680 CAAACGTTGTTGATCTGGCGGGATACCTTCTTTATCTTGGATTTTGGCTTTGACATTTTC 102621 Query 29718 TACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAA 29777 | |||||| ||| || || || ||||| || || || || || | ||| || ||||| Sbjct 102620 AATAGTGTCGGAAGACTCAACCTCGAGAGTGATGGTCTTCCCTGTAAGGGTCTTCACAAA 102561 Query 29778 TATCTGCATTTT 29789 || ||||| || Sbjct 102560 AATTTGCATGTT 102549 >seq489 Length=245457 Score = 100 bits (110), Expect = 2e-16 Identities = 88/110 (80%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 29575 AGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCA 29634 || ||||| || || || ||||||||||||||||| ||||| | | || || ||| Sbjct 239806 AGAACCAAGTGGAGGGTAGATTCTTTTTGAATGTTGTAATCTGACAGAGTACGCCCATCT 239747 Query 29635 TCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACC 29684 || ||||||||||||||| ||||||| | ||||||||| || |||||||| Sbjct 239746 TCAAGTTGTTTGCCAGCAAATATCAAACGTTGCTGATCAGGTGGAATACC 239697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385192735079817