Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_023611.1 Length=198533 Score E Sequences producing significant alignments: (Bits) Value seq649 91.5 2e-13 >seq649 Length=185080 Score = 91.5 bits (100), Expect = 2e-13 Identities = 125/168 (74%), Gaps = 10/168 (6%) Strand=Plus/Plus Query 192952 ATTATCCACAAAAACCCCTTGTTACCACA-GATAT-TGCAAAATTTAATAAATTAGACGA 193009 |||||||||| ||||| ||||| || ||| ||| | || | ||||| ||||| | Sbjct 159246 ATTATCCACATAAACCTCTTGTAACAACAAGATCTATGGAGTATTTACGTT-TTAGAGAA 159304 Query 193010 TTATCCAAATGGTATTAATGCTATTGTTGCTATAGCTTGCTATACTGGTTATAATCAAGA 193069 || || |||||||||| |||||||||| || || ||||| |||||||||||||| Sbjct 159305 CTA-CCTGCTGGTATTAATTCTATTGTTGCAATTTTATGTTATACCGGTTATAATCAAGA 159363 Query 193070 AGACAGTATTATTTTAAATAAAGCTTCT---ATTGAAAGAGGATTATT 193114 ||| ||| | || |||||| |||||| | ||||||||||| || Sbjct 159364 AGATAGTGTAATATTAAAT---GCTTCTGCAGTAGAAAGAGGATTCTT 159408 Score = 86.0 bits (94), Expect = 8e-12 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Plus Query 193443 ATACCTGAAATAGGGGATAAATTTTGTTC-AGGAATGGCCCAAAAAGGAACTTGTGGTAT 193501 |||||| |||| || ||||| ||| ||| ||| | || | |||||||||||||||| || Sbjct 159773 ATACCTCAAATTGGTGATAAGTTTGCTTCTAGGCACGGTC-AAAAAGGAACTTGTGGAAT 159831 Query 193502 GATTTATTCACAAGAAGATATGCCATTTACAGCTTCAGGTATGGTACCAGATATTATTAT 193561 || ||||||||||||||| || || | |||||| ||| |||||||| || Sbjct 159832 ACAATACAGACAAGAAGATATGCCTTTCACTTGTGAAGGTATCACACCTGATATTATAAT 159891 Query 193562 TAATCCAAATTGTATTCCATCCAGAATGACCATT 193595 |||||| | ||| || ||| | ||||| ||| Sbjct 159892 TAATCCTCACGCTATCCCTTCCCGTATGACAATT 159925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132843798360