Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq208 127 4e-24 >seq208 Length=490746 Score = 127 bits (140), Expect = 4e-24 Identities = 208/297 (70%), Gaps = 2/297 (1%) Strand=Plus/Minus Query 183010 ACACATGACCCTCTATGGAATGCATCACAAATACAGATGATGAGAGAAGGAAAAATGCAT 183069 ||||||||| ||| |||||| | ||||||||||| || | | ||||| || |||||| Sbjct 174802 ACACATGACGATCTTTGGAATTCTGCACAAATACAGTTGGTAAAGGAAGGCAAGATGCAT 174743 Query 183070 AGTTTTTTACGAATGTACTGGGCTAAAAAGATACTTGAATGGACAAGAACTCCGGA-AGA 183128 |||| |||| ||||||||||| ||||||||||| |||||||| ||||| || ||| Sbjct 174742 GGTTTCCTACGCATGTACTGGGCAAAAAAGATACTAGAATGGACTGATACTCCAGATAGA 174683 Query 183129 TGCTTTGAGTTATAGTATCTATATGAACAATAAGTACGAACTAGACGGTACGGATCCTAA 183188 || | | || || ||| | || | || || | || ||| || |||| Sbjct 174682 -GCACTAGCTGATGCAATTTATCTCAATGACAAATATAGCATGGATGGTCGTGACCCTAG 174624 Query 183189 CGGATACGTAGGTTGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAG 183248 || | || || ||||||||||| || || || | || ||| | |||| |||||| Sbjct 174623 TGGTTTTGTTGGGTGTATGTGGTCAATATGTGGCATTCATGATCAGGGATGGAGAGAAAG 174564 Query 183249 ACCTATATTTGGAAAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAAATTTGA 183305 | || |||||||| || || |||||||| ||||| | | |||| || ||||| Sbjct 174563 AGAAATTTTTGGAAAAATTAGGTATATGAACTATGAAGGATGCAAGAGAAAGTTTGA 174507 Score = 84.2 bits (92), Expect = 4e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 182414 TTATACAGGTAGACGCTCACAATATAGTACCTTGTTGGGAAGCTTCTGACAAAGAAGAAT 182473 |||||||||| || | || ||||| ||||||||||||| ||| ||||||||| |||||| Sbjct 175623 TTATACAGGTTGATTCCCATAATATTGTACCTTGTTGGGTAGCCTCTGACAAACAAGAAT 175564 Query 182474 ACGGTGCAAGAACTTTAAGAAAAAAGATATTTGATAAGTTATATGAATATATGACAGAAT 182533 | ||||||||| || |||| || || | || ||| || | | | ||||||| Sbjct 175563 ATTCTGCAAGAACAATACGAAACAAAATCAACAACAAATTACCCGAGTTTTTAACAGAAT 175504 Query 182534 TTCC 182537 |||| Sbjct 175503 TTCC 175500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903347543388320