Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq306 95.1 8e-15 seq489 82.4 5e-11 >seq306 Length=365715 Score = 95.1 bits (104), Expect = 8e-15 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||||||||| ||||| | || || || || || |||||||||||| ||||| || | Sbjct 85322 CACCACCTCTTAAACGAAGTACTAAGTGAAGTGTAGACTCTTTTTGTATATTGTAGTCAG 85381 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATC 33635 |||||||||| | || |||||||| || || |||||||| | ||| || ||||| Sbjct 85382 AGAGTGTGCGACCATCTTCCAATTGCTTGCCAGCAAAAATAAGACGTTGTTGATC 85436 >seq489 Length=245457 Score = 82.4 bits (90), Expect = 5e-11 Identities = 95/128 (74%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||||||||||| | | ||||| || || || |||||||| ||||||||||| | Sbjct 239823 CACCACCTCTCAGTCTAAGAACCAAGTGGAGGGTAGATTCTTTTTGAATGTTGTAATCTG 239764 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | || || || | || || | |||||| || ||||| |||||||| |||||||| | | Sbjct 239763 ACAGAGTACGCCCATCTTCAAGTTGTTTGCCAGCAAATATCAAACGTTGCTGATCAGGTG 239704 Query 33641 GCACACCT 33648 | | |||| Sbjct 239703 GAATACCT 239696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328681417727040