Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23]
5,637 sequences; 395,073,589 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq308 102 5e-17
seq489 89.7 3e-13
>seq308
Length=372676
Score = 102 bits (112), Expect = 5e-17
Identities = 146/202 (72%), Gaps = 3/202 (1%)
Strand=Plus/Minus
Query 34517 CCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATA 34576
||||||| ||||||||||| || | ||| || |||||||||| || || ||||| || |
Sbjct 102741 CCTTTTGGATGTTATAATCCGACAATGTACGTCCGTCTTCAAGCTGCTTGCCGGCGAAGA 102682
Query 34577 TTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAAC-GAT 34635
| ||||| ||||| || ||||| | || || || ||| ||| ||| | ||| || |
Sbjct 102681 TCAAACGTTGTTGATCTGGCGGGATACCTTCTTTATCTTGGAT-TTTGGCTTTGACATTT 102623
Query 34636 AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACA 34695
||| ||||| ||| || || | || || || || || || | || ||||||
Sbjct 102622 TCAATAGTGTCGGAAGACTCAACCTCGAGAGTGATGGTCTTCCCTGTAAGGGTCTTCACA 102563
Query 34696 AAAATCTGCATGTTGATTGTAT 34717
||||| |||||||||| |||||
Sbjct 102562 AAAATTTGCATGTTGA-TGTAT 102542
>seq489
Length=245457
Score = 89.7 bits (98), Expect = 3e-13
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| || | | ||||| ||||| || || ||||||||||| ||||||||
Sbjct 239821 CCACCTCTCAGTCTAAGAACCAAGTGGAGGGTAGATTCTTTTTGAATGTTGTAATCTGAC 239762
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598
|| || ||| | |||||||||||||| || |||||||| ||||| || || || || ||
Sbjct 239761 AGAGTACGCCCATCTTCAAGTTGTTTGCCAGCAAATATCAAACGTTGCTGATCAGGTGG 239703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314707977781421
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |