Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq308 138 8e-28 seq489 84.2 1e-11 >seq308 Length=372676 Score = 138 bits (152), Expect = 8e-28 Identities = 145/191 (76%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 || ||||| ||||| || || ||||| || || || || ||||||||||| ||||| || Sbjct 102549 AACATGCAAATTTTTGTGAAGACCCTTACAGGGAAGACCATCACTCTCGAGGTTGAGTCT 102608 Query 23668 ACGGACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGAT 23727 | |||||| |||||| | ||| ||||| || ||||||||| | ||||||||| Sbjct 102609 TCCGACACTATTGAAAATGTCAAAGCCAAAATCCAAGATAAAGAAGGTATCCCGCCAGAT 102668 Query 23728 CAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTAC 23787 ||||| ||||| || || |||||||| || || ||||||| ||| || || ||||| Sbjct 102669 CAACAACGTTTGATCTTCGCCGGCAAGCAGCTTGAAGACGGACGTACATTGTCGGATTAT 102728 Query 23788 AACATACAAAA 23798 ||||| ||||| Sbjct 102729 AACATCCAAAA 102739 >seq489 Length=245457 Score = 84.2 bits (92), Expect = 1e-11 Identities = 94/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 23712 AGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACG 23771 |||| | || || ||||| || ||||| |||||||| ||||||||||| ||||| | || Sbjct 239696 AGGTATTCCACCTGATCAGCAACGTTTGATATTTGCTGGCAAACAACTTGAAGATGGGCG 239755 Query 23772 CACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCG 23831 ||| | ||||||||||| |||||||| || || | || || ||| | || || | Sbjct 239756 TACTCTGTCAGATTACAACATTCAAAAAGAATCTACCCTCCACTTGGTTCTTAGACTGAG 239815 Query 23832 AGGAGG 23837 ||| || Sbjct 239816 AGGTGG 239821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337986378423596