Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq5637 120 7e-22 seq47 100 7e-16 seq489 89.7 1e-12 seq137 84.2 5e-11 >seq5637 Length=15784 Score = 120 bits (132), Expect = 7e-22 Identities = 86/99 (87%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||||||||| |||||||||||||||||||||||||| | |||||||| ||||| |||| Sbjct 2085 TTCAGGATGTCCAAAAAATCAGAATAAATGTTGATATAAAATAGGATCTCCTCCTCCTGC 2026 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 |||||||||||| |||||| || |||| ||||||||| Sbjct 2025 TGGATCAAAAAATGAAGTATTTAAGTTTCGATCAGTTAA 1987 >seq47 Length=924385 Score = 100 bits (110), Expect = 7e-16 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 370668 ATAATTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGC 370727 ||| |||| |||||||||||||||| |||||||||||||| | |||||||| ||||| | Sbjct 216334 ATACTTCAAGATGACCAAAAAATCAAAATAAATGTTGATATAAAATAGGATCTCCTCCTC 216275 Query 370728 CTGATGGATCAAAAAAGCTAGTATTAAAATTTC 370760 | | ||||||||| || |||||| ||||||| Sbjct 216274 CAGCTGGATCAAAGAATGAAGTATTTAAATTTC 216242 >seq489 Length=245457 Score = 89.7 bits (98), Expect = 1e-12 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 ||||| || || | |||||| || ||||||||||| | |||||||| | || ||| | | Sbjct 239812 AGTCTAAGAACCAAGTGGAGGGTAGATTCTTTTTGAATGTTGTAATCTGACAGAGTACGC 239753 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 |||||||| || || || ||||| || || | ||||| || || || ||||||||| Sbjct 239752 CCATCTTCAAGTTGTTTGCCAGCAAATATCAAACGTTGCTGATCAGGTGGAATACCT 239696 >seq137 Length=612403 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 5019 CTTCAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATGGT 5078 || ||||| || || || ||| | || |||| || || |||| ||| ||||||||||| Sbjct 178300 CTGCAATATCTGGCTCCCTACTCTGGATGTGCCATGGGTGAATTTTTCAGAGATAATGGC 178359 Query 5079 AAACATGCTTTAATCATCTACGATGATTTAAGTAAACAA 5117 ||||| ||| | |||||||| ||||||||| ||||||| Sbjct 178360 AAACACGCTCTTATCATCTATGATGATTTATCTAAACAA 178398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192445070552078