Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq306 95.1 1e-14 >seq306 Length=365715 Score = 95.1 bits (104), Expect = 1e-14 Identities = 108/142 (76%), Gaps = 5/142 (4%) Strand=Plus/Minus Query 111201 AGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGAT--TCT 111258 |||| ||||| ||||||||| | ||||||| ||| ||||| |||||||||||| || Sbjct 85449 AGGCATTCCCCCGGATCAACAACGTCTTATTTTTGCTGGCAAGCAATTGGAAGATGGTCG 85390 Query 111259 AAAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTG 111318 | ||| | | || || |||||||||||||| |||||||| || ||||| | ||| | Sbjct 85389 CACACTCT--CTGACTACAATATACAAAAAGAGTCTACACTTCACTTAGTACTTCGTTTA 85332 Query 111319 CGCGGTGGCAATAAATAAACGT 111340 | ||||| |||| |||||| Sbjct 85331 AGAGGTGGTGCTAAA-AAACGT 85311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421782221175112