Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq476 150 2e-31 >seq476 Length=239761 Score = 150 bits (166), Expect = 2e-31 Identities = 164/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 23779 ATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGA 23838 |||||||||||||||| ||| ||||||||||| ||||| ||||| || || || || Sbjct 225774 ATATATGTATCAATTAATAAGCTATACATTTCTGAATGTATATTCTCCATCATTATTTGG 225715 Query 23839 AACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAA 23898 || ||||||||||||||||| |||| | |||||| || | | |||||| || | | | | Sbjct 225714 AATCCATAAAAACATCTAGCCTCAGTTACTTGAACTTCTTGAGAAAATCGTTCAACAAGA 225655 Query 23899 TTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGT 23958 ||||| |||||||| ||||| ||||||||| || || | || | || |||||| Sbjct 225654 TTTTCATTAACAATGCCATCTGAAGCAGCAAAAAATGCTAATACGTGGGATACAAAATGA 225595 Query 23959 CTTTCATCAGTTGATAATTTTTTCCAATCATTAATATC 23996 | ||||||| | ||| | ||||||||| || ||| Sbjct 225594 CGTTCATCATCAGTCAATCTAATCCAATCATCAAGATC 225557 Score = 143 bits (158), Expect = 3e-29 Identities = 170/229 (74%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590 ||||||| ||| ||||| ||||| ||| |||||||||||||||||||||| ||| | Sbjct 226101 CTTCATCTCTAGAAATCAGCTCATTGCTAAAAGTTAATCCTGGCATTAATCCTCTTTTCT 226042 Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650 | | |||||||| ||||||||| ||| || || || ||||| || ||||| ||||| | Sbjct 226041 TCAACCAAAATAATGCAGCAAAACTTCCAGAGAAAAATATACCTTCCACAGCAGCAAATG 225982 Query 23651 CCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAATCCAtttttttGTCCAATTAG 23710 | || | | | |||||| ||||| || |||| |||||||| | ||||| | Sbjct 225981 CAACTAACCTTTCACCAAAAGTTGCTTTGCTATCACTTATCCATTTAAGAGCCCAATCTG 225922 Query 23711 CCTTCAATTTTACACACTCAATTGTTTCAATTGCTTTTAAGAGAAAAGT 23759 ||||| ||||||||| || |||||||| || || || | |||||| Sbjct 225921 CCTTCTTTTTTACACATGGCATGGTTTCAATGGCATTAAATA-AAAAGT 225874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521451254651800