Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq607 100 4e-16 seq649 86.0 8e-12 >seq607 Length=188712 Score = 100 bits (110), Expect = 4e-16 Identities = 108/142 (76%), Gaps = 1/142 (1%) Strand=Plus/Plus Query 155915 TATCTTCAATTCCAACCGCCCAGGTCTTAATAATGCTTCGTCAATTAAGTCGGGTCTGTT 155974 |||||| | ||| | || |||||||| || || ||||| ||||| | ||| ||| || Sbjct 55104 TATCTT-ACTTCAAGTCGACCAGGTCTCAACAACGCTTCATCAATCATGTCTCTTCTATT 55162 Query 155975 GGTCATACCTATGATTAAAATGTTGTTTAAAGATTCTACACCGTCTATTTTAGACAATAA 156034 ||||||||||| | ||| |||||||||| || || ||||| ||||||| || || Sbjct 55163 AGTCATACCTATAACTAAGATGTTGTTTAGTTGCTCAACTCCGTCAATTTTAGCTAACAA 55222 Query 156035 TTGATTGACTACGGCGTCGTGC 156056 ||||| ||||||| ||||||| Sbjct 55223 CTGATTCACTACGGTGTCGTGC 55244 >seq649 Length=185080 Score = 86.0 bits (94), Expect = 8e-12 Identities = 109/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 63744 AATACCAGAAATAGGTGATAAATTTGCTTCTTTTACAGCTCAAAAAGGTACGTGTGGTAT 63803 |||||| |||| |||||||| ||||||||| | ||||||||| || ||||| || Sbjct 159772 AATACCTCAAATTGGTGATAAGTTTGCTTCTAGGCACGGTCAAAAAGGAACTTGTGGAAT 159831 Query 63804 GATTTATCGACAAGAAGATATGCCTTTTACCAAAGACGGTATCGTACCCGATCTCGTCAT 63863 || ||||||||||||||||||| || || |||||| ||| ||| | | || Sbjct 159832 ACAATACAGACAAGAAGATATGCCTTTCACTTGTGAAGGTATCACACCTGATATTATAAT 159891 Query 63864 CAATCCACACGCTTTTCCCAGTCGTATGAC 63893 ||||| |||||| | || |||||||| Sbjct 159892 TAATCCTCACGCTATCCCTTCCCGTATGAC 159921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 667028196213720