Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diuraphis_20noxia_20[refseq_20GCF_5F001186385.1_202015-07-23] 5,637 sequences; 395,073,589 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq308 86.0 6e-12 >seq308 Length=372676 Score = 86.0 bits (94), Expect = 6e-12 Identities = 139/195 (71%), Gaps = 4/195 (2%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 |||| || |||||||| || || | || || |||| || ||||||||||||||||| | Sbjct 102741 CCTTTTGGATGTTATAATCCGACAATGTACGTCCGTCTTCAAGCTGCTTGCCGGCGAAGA 102682 Query 41733 TCAGGCGCTGTTGGTC-CGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 ||| || ||||| || |||||| || || || | | || |||| |||| || Sbjct 102681 TCAAACGTTGTTGATCTGGCGGGATACCT-TCTTTAT-CTTGGATTTTGGCTTTGACATT 102624 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | ||||||| ||||| ||||| | || || || || || || || ||||| || Sbjct 102623 TTCAATAGTGTCGGAAGACTCAACCTCGAGAGTGATGGTCTTCCCTGTAAGGGTCTTCAC 102564 Query 41851 GAAAATCTGCATGTT 41865 ||||| |||||||| Sbjct 102563 AAAAATTTGCATGTT 102549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462271424904400