Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq24486 87.8 2e-12 seq25099 84.2 2e-11 >seq24486 Length=213816 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 28956 GTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAA 29015 || ||||||||||| ||| | ||||| ||||| ||||| ||||| ||| || ||| Sbjct 88139 GTCAAAATGCAAATCTTCGTGAAAACCTTGACTGGCAAGACCATCACCTTGGAGGTGGAG 88198 Query 29016 CCCGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTA 29075 ||| | || || | | || | ||| || || || || || || | ||| | Sbjct 88199 CCCTCTGACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGAATTCCCCCA 88258 Query 29076 GATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGAT 29135 |||||||| | || ||||| || ||||| || ||||| ||| | ||| || |||| Sbjct 88259 GATCAACAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGAC 88318 Query 29136 TACAATATTCAGAAGGAATCTACTCTTCACATGGTG 29171 ||||| || |||||||| || || | ||| ||||| Sbjct 88319 TACAACATCCAGAAGGAGTCGACCTTGCACTTGGTG 88354 >seq25099 Length=83779 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 29075 AGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGA 29134 |||||| || | || |||||||| ||||| |||||||| ||| ||| || |||| Sbjct 21044 AGATCAGCAGCGTCTCATCTTTGCTGGCAAGCAACTGGAGGATGGTCGTACTTTGTCCGA 20985 Query 29135 TTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 || ||||| |||||||| |||||||||||| |||| || || | || ||||| Sbjct 20984 CTATAATATCCAGAAGGAGTCTACTCTTCACTTGGTCTTGCGTCTCCGCGGAGG 20931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428198423027870