Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq24188 100 3e-16 >seq24188 Length=1289977 Score = 100 bits (110), Expect = 3e-16 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 145687 GGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGC 145746 || ||||| || || || || || || | || |||| | ||||| ||||| || ||| Sbjct 950404 GGTTCCACATGATTAAGATACACATGAGAATCTCCCATGGTGTGGACAAAGTCACCAGGC 950345 Query 145747 TCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAG 145806 | | || || | ||||| | ||||||||| ||||| | || ||| ||||| || Sbjct 950344 TTCAATCCGGTCACATGGGCAATCATGTAGGTGAGCAGCGCATAAGAGGCGATGTTAAAA 950285 Query 145807 GGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAG--CTCCCCG- 145863 || ||||| || |||||||| | ||||||||||| || |||||||| |||| || Sbjct 950284 GGAACCCCGAGTCCCATGTCTGCACTTCGCTGGTACAGATGACAGGAGAGTTCTCCTCGA 950225 Query 145864 ---CCCGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCAT 145910 || ||| |||||||| || | |||||| || ||||| ||||| Sbjct 950224 GATTGCGACACATAGAACTGCACCAAGCAGTGGCAAGGAGGCAGTGCCAT 950175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589882413950160