Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq24486 131 1e-25 seq20567 98.7 8e-16 >seq24486 Length=213816 Score = 131 bits (144), Expect = 1e-25 Identities = 168/232 (72%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008 || || ||||| | ||||||| ||||| || |||||||| || ||||| ||||| | | Sbjct 88371 CCACCACGCAGACGCAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 88312 Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068 || || || | ||||||||||| ||||| || | || || | ||| || || ||| Sbjct 88311 AGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGATCTGGGGGA 88252 Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128 | || |||||||| |||||| || || | ||| || ||| ||||||| Sbjct 88251 ATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAGGGCTCCACC 88192 Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCATTTTGA 21180 |||| ||| ||||||||||| || || ||||| || || ||||||||||||| Sbjct 88191 TCCAAGGTGATGGTCTTGCCAGTCAAGGTTTTCACGAAGATTTGCATTTTGA 88140 >seq20567 Length=185169 Score = 98.7 bits (108), Expect = 8e-16 Identities = 141/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 29102 GCGTGTTGCTGCCACGGCGCGTCGTCGGGTTCCCAATCCTTCAGACCGCCGTCGCAGCAA 29161 || || |||| ||| ||| |||||| | ||||||||||| || |||||| | |||| Sbjct 55441 GCATGCTGCTCCCAGGGCTCGTCGTTGTCGTCCCAATCCTTGAGGCCGCCGCCACAGCTG 55500 Query 29162 AAGCACCGCGTCTTGTCGCCCTGGCCAGTGTAAAAGAATCCGGCCTCGGCCAACTCTTCG 29221 ||||| ||| || || ||| ||||| ||||| || |||||||| | || | Sbjct 55501 AAGCAACGCACACGATCCCCGACGCCGGTGTAGAAGAAACCCGCCTCGGCGAGCTGCTGC 55560 Query 29222 GGCCGCTGTTTCAACCCGCGGGGCCACTCCGCAAAGGTGCGCAAACGCGCGGCTTCCGTG 29281 ||| ||| |||| ||| ||||| ||| | ||| |||||| |||||| | || || Sbjct 55561 GGCTTCTGCTTCATGTTGCGCGGCCAATCCTCGAAGCTGCGCAGACGCGCCGTCTCGATG 55620 Query 29282 GCATACTGCGGGTGCGCGG 29300 ||||||| ||| | | ||| Sbjct 55621 GCATACTCCGGATACTCGG 55639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422123574831464