Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq16702 156 6e-33 seq14047 84.2 3e-11 >seq16702 Length=433992 Score = 156 bits (172), Expect = 6e-33 Identities = 191/263 (73%), Gaps = 4/263 (2%) Strand=Plus/Minus Query 202750 AAATAAATCAACATCAAATTTACGTCTACATCCTTCATAACTCATATATCTAATTTTACC 202809 |||| || |||||||||||| ||| ||||||||| ||| ||||||| | ||| || || Sbjct 196789 AAATGCATTAACATCAAATTTTCGTTTACATCCTTGATAGTTCATATAGCGAATCTTGCC 196730 Query 202810 AAATATTGGTCTTTCTTTCCATGCTCTATCATGAATACCACAAATTGACCACATACATCC 202869 ||||| | | || |||||||| ||||||| ||||| | | |||||||| || || Sbjct 196729 GAATATGGCACGCTCCTTCCATGCGTTATCATGGATACCCCCGACAGACCACATGCAGCC 196670 Query 202870 AACATATCCATTTGGATCACGTCCATCTATAAAATATTTATCATTTA--AATNNNNNNNN 202927 ||||| ||||| |||||||| ||||| | | ||||| || || | ||| Sbjct 196669 CACATAACCATTGGGATCACGGCCATCCAGACTGTATTTGTCGTTCAGCAAT--ATGCTA 196612 Query 202928 NNNNNNAATGCTTCTTCTGGTGATTTTGTCCATTCTAATAtttttttAGCCCAATACATT 202987 || || | ||||||| || ||||||||| | ||| || || |||||||||||| Sbjct 196611 TACTCCAACGCCTGCTCTGGTGTTTCTGTCCATTCAAGTATCTTCTTGGCCCAATACATT 196552 Query 202988 CTTAAATATCCATGCATTTTACC 203010 || | | ||||||||||||| || Sbjct 196551 CTCAGAAATCCATGCATTTTGCC 196529 >seq14047 Length=15719 Score = 84.2 bits (92), Expect = 3e-11 Identities = 106/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 124623 AAAATTCAAGATAAAGAAGGTATACCACCTGATCAACAAAGGCTTATTTTTGCAGGAAAA 124682 || || ||||| |||||||| || || || ||||| || | || || || || || || Sbjct 15555 AAGATCCAAGACAAAGAAGGAATCCCCCCAGATCAGCAGCGTCTGATCTTCGCCGGCAAG 15614 Query 124683 CAATTAGAGGATAGTCGAACATTAGAAGATTATAATATTCAAAAAGAATCAACTTTGCAT 124742 || | |||||| |||| || | |||||| ||||||||||| ||||| || | || Sbjct 15615 CAGCTGGAGGATGGTCGCACTCTTTCAGATTACAATATTCAAAAGGAATCGACACTTCAC 15674 Query 124743 TTGGTTTTACGTTTACGAGGTGGTAT 124768 ||||| | || |||| |||||||| Sbjct 15675 TTGGTCCTCCGACTACGTGGTGGTAT 15700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755207133907200