Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_002188.1 Length=288539 Score E Sequences producing significant alignments: (Bits) Value seq16702 152 9e-32 >seq16702 Length=433992 Score = 152 bits (168), Expect = 9e-32 Identities = 212/297 (71%), Gaps = 0/297 (0%) Strand=Plus/Plus Query 189449 CTATGGAACGCGTCACAAATGCAGATGGTGAGAGAAGGAAAAATGCATAGTTTTTTACGA 189508 || |||||| || | ||| ||||| |||| | || || ||||||||| | ||| | || Sbjct 196493 CTTTGGAACTCGGCGCAATTGCAGCTGGTCAATGAGGGCAAAATGCATGGATTTCTGAGA 196552 Query 189509 ATGTATTGGGCTAAGAAGATACTTGAATGGACTAGAACACCTGAAGACGCTTTGAGTTAT 189568 ||||||||||| |||||||||||||||||||| |||||| || | || ||| ||| Sbjct 196553 ATGTATTGGGCCAAGAAGATACTTGAATGGACAGAAACACCAGAGCAGGCGTTGGAGTAT 196612 Query 189569 AGTATCTATTTGAACAACAAGTACGAACTAGACGGCACGGATCCTAACGGATACGTAGGT 189628 || || | ||||| |||| ||| || || ||| ||||| || || || || || Sbjct 196613 AGCATATTGCTGAACGACAAATACAGTCTGGATGGCCGTGATCCCAATGGTTATGTGGGC 196672 Query 189629 TGTATGTGGTCTATTTGCGGATTACACGATAGAGCGTGGAAAGAAAGACCGATATTTGGA 189688 || ||||||||| | | || | || |||| || ||||| || | | ||||| || Sbjct 196673 TGCATGTGGTCTGTCGGGGGTATCCATGATAACGCATGGAAGGAGCGTGCCATATTCGGC 196732 Query 189689 AAGATAAGATATATGAATTATGAGAGTTCTAAGAAGAAATTTGATGTTGCTGTATTT 189745 ||||| | |||||||| ||| | | | ||| |||||||||||| || |||| Sbjct 196733 AAGATTCGCTATATGAACTATCAAGGATGTAAACGAAAATTTGATGTTAATGCATTT 196789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 922892675894160