Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq25128 499 3e-136 seq19105 284 1e-71 seq24486 96.9 3e-15 seq25099 84.2 2e-11 >seq25128 Length=30855 Score = 499 bits (552), Expect = 3e-136 Identities = 1245/1878 (66%), Gaps = 53/1878 (3%) Strand=Plus/Minus Query 22106 TTGTCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCC 22165 |||| ||||| || || || || || || || || || ||||| ||||||||||| || Sbjct 20196 TTGTTGACTGTGAATTGAATAGCATTGGCAGCTGGCTTTGTGCGCAGATAATACATTCCT 20137 Query 22166 GTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCCATAACTCGGC 22225 ||||| || || |||||||| | | ||||| || || || || || || || | || Sbjct 20136 GTCTTGAGGCCTGCCTTCCACGAGAAGAAATGAATGGATGTTAACTTGCCGTAGTTGGGT 20077 Query 22226 AAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCGGCC 22285 | | | || | ||||| || |||||||| || ||||| || || ||||| || ||| Sbjct 20076 TCGGCAACGTGAATGTTGAATGATTGACTCTGGTCAATAAAAGCACCGCGATCAGCTGCC 20017 Query 22286 ATATTTATCAATGTACGCATCGACATTTCCCATACGGTCTTGTACAGTTGCCTGATCTCT 22345 || || || || || ||| |||||||| ||||| ||||| || | || | || Sbjct 20016 ATCTTGATGGTTGACTTCACCGAGATTTCCCAGACGGTTTTGTAAAGATCCCGTACTTCC 19957 Query 22346 AACGGTATCGATTCGATCCTCTGGACGGACCCGTTATTGTGTATGATCAAATTTTTAATC 22405 || || |||||||| | || | ||| || | || ||||| ||| || || Sbjct 19956 TGAGGAATGGATTCGATGTTTTGTATGGAGCCACGACTGGCAATGATTTGATTCTTCATG 19897 Query 22406 GTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCACCACTTGA 22465 ||| | ||| ||| | | |||| ||||| | || |||| | || ||||| | Sbjct 19896 TCATCATCCCATAAATCCAGTTCGGTTAAATCCCGCAACAAATGATGATTTACCACATTG 19837 Query 22466 AACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGAAAGATTCA 22525 ||||| |||||||| ||||| | ||||||||| || || |||| || || || ||| Sbjct 19836 AACTCTCCGGACAAAACGCGCCTGGTGTAAATGTTTGAAGTATACGGCTCAAAGGACTCA 19777 Query 22526 TTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTAGCGAGTTT 22585 || || |||| ||||| || || || || || ||||| || |||| || ||||||||| Sbjct 19776 TTATTACCCATGATCTGGGCAGTAGATGCCGTGGGCATTGGAGCCACAAGCAGCGAGTTT 19717 Query 22586 CTCAAGCCGTG--CTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAGATCGGACG 22643 || | ||| || |||||| || | | | ||||| | ||| ||||| || | | | Sbjct 19716 CTAACGCCATGCTCTTTGATTTTCAATTTTAGAGCA--GTCCAATCCCAAAGGTTTGTGG 19659 Query 22644 GCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGACTCGCCGGGCTGCCTTCGT 22703 | ||| ||||||||||||||||| |||| | || ||| |||| | || ||| Sbjct 19658 GTGTC---TTGTCCCACATATCGTACTGCAGAATTCCCTTGCTCACCGGACAACCAGCGT 19602 Query 22704 ACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAACGCGCCGTAAT 22763 | ||||| || ||||| | | || || || || || ||||| | || || || | Sbjct 19601 AGGTTTCATAGGGACCGTCCTTTTGAGCCAGCTCACAACTGGCCTCAAGGGCACCATAGT 19542 Query 22764 ATATAGTCTCGAAGATTTTC---TTGTTCAATTCGGCGGCGGCGACGCTTTCGTACGGCA 22820 | || || |||||||| | | ||| |||| |||| | | || || || || | Sbjct 19541 AGATGGTTTCGAAGATCTGCTGATTGAGCAAT---ACGGCTTTGTCACTCTCATAGGGAA 19485 Query 22821 TACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGATCGGTCGGTTTT 22880 ||||||| | || ||||| || | ||||||||||| || || || || || | | Sbjct 19484 AGCGCATCAGAATTAAGGCGTCGGCAAAGCCCTGAACGCCAATGCCAATGGGACGATGTC 19425 Query 22881 TCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGATTGTTCTGTTCA 22940 | | ||| || ||||||||||||| ||||| |||| ||| || || |||||| Sbjct 19424 TTAAATTGGATTTCTTTGCCTCGGGCAGCGGATAGTAATTGATATCAATGATTTTGTTCA 19365 Query 22941 AGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTAAACGCCCGAT- 22999 | |||||||| ||| |||| || | | || ||| || | | Sbjct 19364 AATTTCTGGTGACAGTTTTAGTAACTTCCTTTAGTTTCTTGAAATCG--AATGTTTTCTC 19307 Query 23000 TGTA-CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCATACGGCCACCTCGTCTTT 23058 || | |||||| | || | ||| ||||| || | |||||| ||||| | ||| || Sbjct 19306 TGAAGTCACAAACATATTCAAGGCTATCGATGCCAAATTGCAGACGGCAATCTCATCGGG 19247 Query 23059 GGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTTTATCGTGCCCAAATTGCT 23118 | || || || ||||||||||| || || ||||| || || || ||||| | ||| Sbjct 19246 TGCCGAATATTCAACAATTTCGGTGCAGAGGTTGCTGCATTTGATGGTGCCAACATTCTG 19187 Query 23119 CTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTACGGCGTGCCCGTCTCGAC 23178 ||| ||||| || | ||||| || || ||| ||||||||||||| ||||| ||||| || Sbjct 19186 CTGATTGCTCTTCCTGTTGCAAGAGTCTTTGAAGAGCATGTACGGAGTGCCAGTCTCAAC 19127 Query 23179 CTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGA---ACACG--TCGCACGTAC 23233 || || || | || || ||| | ||| || || | | ||||| | || || | Sbjct 19126 TTGAGATTCAACAATGGCATACCAAAGAGTTTGTGCTTTAATCACACGATTTGCGCGACC 19067 Query 23234 CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCACCGTAACAGTCGGCC 23293 || || ||| |||||| |||| | ||||| || | || || ||| || Sbjct 19066 CTCGCT-----CTCATACTTTGTATACAGCTTCTCAAAGTCATCCCCCCAAACGTCTTCC 19012 Query 23294 AGGCCGGGCGATTGCATCGGACACATGAGACTCCACATTGAGTCATT---TTCAACGCGT 23350 | |||||| | | ||||||| || ||| || ||||| ||| || || Sbjct 19011 AAGCCGGGACACTTGTGAGGACACAACAGCGACCA-AT--CCTCATTGGCTTCCACACGC 18955 Query 23351 CTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCT 23410 ||||||| ||||| |||||||| | |||||||| || || || || | ||| || Sbjct 18954 TTCATAAACAGATCGGGTATCCACAAGGCGTAGAAGAGATCACGAGCTCTGTGCTCTTCC 18895 Query 23411 TTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGG 23470 ||||| ||||||||||| | ||||| || || || | || | |||||| || || ||| Sbjct 18894 TTGCCCGTGTTCTTTTTGAGGTCCAAGAACTCAAAGATATCGGAATGCCAAGGTTCCAGG 18835 Query 23471 TAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTG 23530 |||| |||||| ||||| || | ||| ||| || |||||||| ||||| ||| || Sbjct 18834 TAAATGGCAAAAGCGCCTGGCCGCTTGCCGCCACCTTGATCGACATAACGAGCCACATTA 18775 Query 23531 TTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTACGCCCGCCACA-CT 23589 || ||||||| ||||| ||||| | ||| || || | ||| | |||||| | Sbjct 18774 TTAAACACTCTGAGCATGGGCACCAAACCATTTGAAGTGCC----ATTAGTGCCACAGAT 18719 Query 23590 CGA---ACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGCCCGATTTCGA 23646 ||| || || || |||| || || | || || ||||| || | ||||| || Sbjct 18718 CGAGGTGCCCTTGGCACGAATACAATGCACATTGAGTCCAATGCCACCAGCGGATTTGGA 18659 Query 23647 TATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATG----CTGTCCTCTTTGG 23702 ||||| || || || | | | | | | ||||| |||||| | | | ||| Sbjct 18658 GATCATTGCACACTGCTCGACGGACTTGAAAATGCCTTCGATGGAATCGGAAACCATTGT 18599 Query 23703 TCGCGACCAAGAAACACGAAGACATTTGCG--CTTTGGGCGTAGCGGCCGAGAACAGTGT 23760 | | | ||||||||| ||||| || | | | | || || || | || || || Sbjct 18598 T----AGAAGGAAACACGATGACATCTGGGGACGATTG--GTGGCAGCAGCAAATAGCGT 18545 Query 23761 CGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGGCATC 23820 || || |||||||| || | | ||| | |||||||| || |||| |||| ||| Sbjct 18544 TGGCGATGCATGCGTAAAATAGCGTTCCGATAACAGATTGTAAGTCTCGACAGCGGAATC 18485 Query 23821 AATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCTCGAC 23880 ||||| || || || || || || || || | ||||| ||||| || || | ||| | Sbjct 18484 GATGTCTTCGCCATGGATTCCAATCGCCACTCTCATCAGCATGTGCTGCGGACGTTCGGC 18425 Query 23881 CGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAATAGTC 23940 | ||| || || || | || ||| ||||| | | || || || |||||||||| Sbjct 18424 GATTTTGCCATTGATCTTTAGCAAATACGAACGCTCGAGGGTCTTGAAGCCAAAATAGTT 18365 Query 23941 ATAGTTAAAGTCACGATC 23958 ||| ||| |||||||| Sbjct 18364 GTAGCCAAAATCACGATC 18347 >seq19105 Length=237168 Score = 284 bits (314), Expect = 1e-71 Identities = 570/839 (68%), Gaps = 26/839 (3%) Strand=Plus/Minus Query 57586 AAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCG 57645 || |||| ||||||||||| ||||||||||||||||| || ||||| ||||| ||| | Sbjct 37450 AACAGGCTGAAGCATCGTTCTGGACCGTCGAAGAAGTGGATCTGTCCAAGGACATGACTG 37391 Query 57646 ATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCG 57705 |||||| || | || |||| | |||| || || |||||||| || || | Sbjct 37390 ATTGGGCCAAGCTTACGGATAATGAGCGTCATTTCATATCGCATGTGTTGGCCTTCTTTG 37331 Query 57706 CCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAG 57765 | || || ||||| ||||||||||| ||| |||||||| | ||| ||||||||||| | Sbjct 37330 CTGCTTCTGATGGAATTGTTAACGAAAATCTGGTCGAACGTTTTAGCCAAGAAGTGCAGG 37271 Query 57766 TGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAA 57825 |||| ||||| | |||||||| || || || | ||||| || || |||||||| |||| Sbjct 37270 TGACCGAGGCACGTTGCTTTTATGGCTTCCAGATTGCCATGGAGAATGTGCATTCCGAAA 37211 Query 57826 TGTATTCGCTACTCATCGATACGTACGTGAAGGA----CAACGACGAGAAACGTAGACTG 57881 |||| | ||||| || || || | | ||| || | ||||| || || Sbjct 37210 TGTACAGTGTGCTCATTGACACCTATATCAGGGATCCTCATCAGCGAGA---CTA-TCTC 37155 Query 57882 TTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGG 57941 ||||| || || ||||| ||||| || | ||||||||| ||| | | ||| Sbjct 37154 TTCAATGCCATTGAAACGATGCCGGCTGTTAAGCGGAAGGCAGACTGGGCTCTTTCTTGG 37095 Query 57942 A----TAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGA 57997 | | ||| | |||| || | || | | || || || || || || || Sbjct 37094 ATCTCTTCGAAG----GCTGCCAACTTTGGTGAACGTATTATTGCTTTTGCTGCTGTTGA 37039 Query 57998 AGGTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGAT 58057 ||| || ||||| || |||||||| | || || ||| ||||||| || || || || Sbjct 37038 AGGCATCTTCTTCAGTGGGAGCTTTGCATCCATCTTCTGGCTGAAGAAGCGTGGACTTAT 36979 Query 58058 GCCCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTT 58117 ||| || || || || |||||| ||||| || ||||| || ||||| ||| ||| || Sbjct 36978 GCCTGGACTTACATTCTCCAACGAATTGATCTCTCGCGATGAAGGTCTGCATTGTGACTT 36919 Query 58118 TGCGTGCCTAATGTACTCTCACATT--GTCAATAAACCGACGCGGGATCGCATCTTGGAC 58175 |||| || |||| || ||||| || | || | ||||| |||||| | || Sbjct 36918 TGCGGTGCTTATGT--TCCAACATTTGGTGCAGCGGCCTAGTCGGGAACGCATCATTGAA 36861 Query 58176 ATTATCACCGAGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCC 58235 || || || || || || | || || | ||||| ||||||| || || || || | Sbjct 36860 ATCATAACGGATGCTGTGACTATTGAGCAGGAGTTCCTCACCGATGCGCTGCCCGTCAAC 36801 Query 58236 ATGCTCGGTATGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTT 58295 || | || |||||| || | ||||||| | || || |||||||| || || | || Sbjct 36800 TTGATTGGCATGAACTGTGCTCTGATGTCCGAATATATCGAGTTTGTCGCTGATCGCCTA 36741 Query 58296 TTGCTCGAACTGATTGGAGAGCGTCA---TTACAACACGAAAAATCCGTTTGATTTTATG 58352 ||| | || | |||| | | | | ||||||||| || ||||| || || ||| Sbjct 36740 TTGGTTGA---GCTTGGCGTGGGCAAGATTTACAACACAAAGAATCCATTCTCGTTCATG 36684 Query 58353 AATCTGATCTCGCTCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCA 58411 | ||||||| | || ||||| || ||||| ||||| || ||||| | |||||||| Sbjct 36683 GAGATGATCTCTTTGGATGGCAAAACCAACTTCTTCGAGAAGAAAGTGGGTGAATATCA 36625 >seq24486 Length=213816 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/235 (69%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 31187 TCAAACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAA 31246 ||||| |||||||| ||||| || || |||| ||||| || |||||| | || || || Sbjct 88140 TCAAA-ATGCAAATCTTCGTGAAAACCTTGACTGGCAAGACCATCACCTTGGAGGTGGAG 88198 Query 31247 CCGTCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCC 31306 || || |||| |||| | ||||| | || ||||||||| || | || || Sbjct 88199 CCCTCTGACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGAATTCCCCCA 88258 Query 31307 GACCAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGAT 31366 || || |||||||| || ||||||||||| ||| |||| || ||| || ||| Sbjct 88259 GATCAACAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGAC 88318 Query 31367 TATAACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 || ||||| || || || ||||| | || |||| || | ||| | || |||| Sbjct 88319 TACAACATCCAGAAGGAGTCGACCTTGCACTTGGTGCTGCGTCTGCGTGGTGGTA 88373 >seq25099 Length=83779 Score = 84.2 bits (92), Expect = 2e-11 Identities = 145/210 (69%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 31214 CTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCCGACAGTGTCGAAACGGTCAAA 31273 ||||| || || || |||||| | || || ||||| || || | | || | || || Sbjct 21398 CTGACCGGAAAGACCATCACCCTGGAAGTAGAACCTTCTGATACCATTGAGAATGTGAAG 21339 Query 31274 CAGAGAATAGCG--GACAAGGAAGGCGTGCCGCCCGACCAGCAGCGTCTAATATTCGCTG 31331 | || | | || |||||||| | || || || ||||||||||| || ||||| | Sbjct 21338 NGGCCAAGATCCAAGATAAGGAAGGAATCCCTCCAGATCAGCAGCGTCTCATCTTCGCCG 21279 Query 31332 GCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAACATTCAAAAAGAATCGACTC 31391 |||| ||| |||| || | || | |||||||||||||| ||||| ||||| | Sbjct 21278 GCAAGCAGCTGGAGGATGGTCGCACCCTTTCTGATTATAACATTCAGAAAGAGTCGACCC 21219 Query 31392 TTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||| |||| || |||| | ||||||| Sbjct 21218 TTCACTTGGTCCTCCGACTCCGAGGCGGTA 21189 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445619553403680