Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq24188 147 2e-30 >seq24188 Length=1289977 Score = 147 bits (162), Expect = 2e-30 Identities = 267/387 (69%), Gaps = 14/387 (4%) Strand=Plus/Minus Query 20958 TCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCCGTGACGTGAGCGATCAGATAC 21017 || |||| |||||| |||||||| || || ||| || || || || || |||| || Sbjct 950374 TCTCCCATGGTGTGGACAAAGTCACCAGGCTTCAATCCGGTCACATGGGCAATCATGTAG 950315 Query 21018 GTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTC 21077 || || || || || |||||||||||| || |||||||| |||||||| || | | Sbjct 950314 GTGAGCAGCGCATAAGAGGCGATGTTAAAAGGAACCCCGAGTCCCATGTCTGCACTTCGC 950255 Query 21078 TGGTACAGCTGGCAGGACAGCTCCCCCCGA------GCCACGTAAAACTGACACAAAAC- 21130 |||||||| || ||||| || || || ||| | ||| || ||||| ||| || | Sbjct 950254 TGGTACAGATGACAGGAGAGTTCTCCTCGAGATTGCGACACATAGAACTG-CACCAAGCA 950196 Query 21131 GTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACGAT 21190 ||| |||||||| || ||||| | | ||| ||| |||||||| |||||| ||| Sbjct 950195 GTGGCAAGGAGGCAGTGCCATTTTGGGTATATCCAAGGGATTCCACGCCGACATAATGAT 950136 Query 21191 GCGCCGATCGTGGGGCCGCCTGTT---AATTAGATCCACCACGTAACGCAGCTGGTCCAC 21247 || ||||| || | |||| ||| ||| | ||| | ||||||| || | Sbjct 950135 ACGACGATCCGAGG---GATTGTTTCGAATCGTATCAATCACTTGCTGCAGCTGATCGAT 950079 Query 21248 CCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCAAAATGTCTCCACTG 21307 || || || ||||| | ||| | ||||| || |||||||| | |||||| Sbjct 950078 GCCTTGTCCGCTGTAGTCATCATCGCAGGTGCGATACTCGGCTCCAAAATGACGCCACTG 950019 Query 21308 GAACCCGTACACCGGCCCCAGATCGCC 21334 ||| ||||| ||||| |||||||| || Sbjct 950018 GAAGCCGTAGACCGGACCCAGATCCCC 949992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427638602893920