Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_005135.1 Length=173591 Score E Sequences producing significant alignments: (Bits) Value seq16043 96.9 4e-15 >seq16043 Length=246680 Score = 96.9 bits (106), Expect = 4e-15 Identities = 152/217 (70%), Gaps = 3/217 (1%) Strand=Plus/Minus Query 6509 GCGATAACATGAAGAAGCGGGCCGCCTTGAATACCCGGGAAGATAGCAGAATTTACTTTC 6568 || ||||| || | |||||||| || || | ||| ||||||| || || || | || Sbjct 128960 GCAATAACGTGCATCAGCGGGCCACCCTGCAGACCGGGGAAGACGGCGGAGTTGATCTTT 128901 Query 6569 TTGGCGATATCAGCATCGTTAGTAAGAATGAGGCCACCACGAGGGCCGCGCAAAGTTTTA 6628 ||||| | | ||||||| || || || || || ||||| ||||| |||| |||||| Sbjct 128900 TTGGCCAGCGCTTCATCGTTGGTCAGGATCAGCCCCCCACGCGGGCCACGCAGCGTTTTA 128841 Query 6629 TGAGTTGTAGTAGTAACAACGTCGGCACCCCATTTGAGTGGATTAGCGTGAAGACGAGCA 6688 || || || | || || || | || | | || || || | || || | |||| Sbjct 128840 TGCGTGGTGGACGTCACCACATGCGCGTGC---TCAAGCGGGTTCGGGTAGAGGCCAGCA 128784 Query 6689 GCAACAAAGCCAGCAAAATGGGCCATATCGACCATCA 6725 || || | |||||||||||||||||||| ||||||| Sbjct 128783 GCCACCAGACCAGCAAAATGGGCCATATCAACCATCA 128747 Score = 82.4 bits (90), Expect = 8e-11 Identities = 199/298 (67%), Gaps = 4/298 (1%) Strand=Plus/Minus Query 6937 CCCGTGAGTGAGATGGCCGCCGCAGTC-CAAGGA-CATAGCGAGAACCGAATCACCCGGC 6994 ||| || || || ||||| ||| | | ||||| ||| | ||||| | ||||| ||| Sbjct 128544 CCCATGCGTCAGGTGGCCACCG--GCCGCAAGGCTCATGCCCAGAACAGTGTCACCGGGC 128487 Query 6995 TTCAGGAGTGCTTGGTAAACTGCCTGGTTTGCTTGTGAACCGGAATGAGGTTGAACGTTT 7054 || || || | | | ||||| || || | | || || || || || || || Sbjct 128486 TTGGACAGCGCCATGAACGCGGCCTGATTGGCGTTGGCGCCAGAGTGCGGCTGCACATTG 128427 Query 7055 GCGAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCTCGATTTCATCG 7114 || ||| | | |||||| ||| | |||||||| ||||| | || |||| |||| Sbjct 128426 GCAAAACCGGCCCCAAACAGCGTTTTTACGCGCTCAATAGCCAGTGTTTCAATTTTATCG 128367 Query 7115 GCTTTTACGCAGCCGCCATAATACCGTTTGCCCGGATATCCCTCAGCATACTTGTTGGTA 7174 | | ||| ||||||||||| || ||||||||| || || |||||||||||||| Sbjct 128366 ACCTCGGAGCACCCGCCATAATAGCGGCGGCCCGGATAACCTTCCGCATACTTGTTGGTC 128307 Query 7175 AAAATAGAACCCTGTGCTTTCATAACATCGTCTGACACATAGTTTTCGGACGCAATCA 7232 | | ||||| || | || ||| | || ||||| ||||||| ||||||| Sbjct 128306 AGCACGCTGCCCTGAGCCTGCAACACAGCTTCAGACACCATGTTTTCGCTGGCAATCA 128249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555180249477840