Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_005260.1 Length=233234 Score E Sequences producing significant alignments: (Bits) Value seq23629 87.8 3e-12 seq23646 86.0 9e-12 seq13822 86.0 9e-12 >seq23629 Length=5648 Score = 87.8 bits (96), Expect = 3e-12 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 108310 CCGTATGGAATTCGAATCCATGTTACCGCCGTGAAAGGGCAGTGTCCTAGTCCACTAGAC 108369 ||||| || ||||||| || |||| ||||||||||||||||||||||||| || |||||| Sbjct 1090 CCGTACGGGATTCGAACCCGTGTTGCCGCCGTGAAAGGGCAGTGTCCTAGGCCTCTAGAC 1149 Query 108370 GAACGG 108375 |||||| Sbjct 1150 GAACGG 1155 >seq23646 Length=1309 Score = 86.0 bits (94), Expect = 9e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 108011 TGGAGCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCA 108070 ||| ||||||| || | |||||| || ||||||| ||||||||||| |||||||||||| Sbjct 213 TGGTGCCCCCATTCAGATTTGAACTGAAGACCTACCGCTTACAAGGCGGTTGCTCTACCA 154 Query 108071 CTGAGCTATA 108080 |||||||||| Sbjct 153 CTGAGCTATA 144 >seq13822 Length=124548 Score = 86.0 bits (94), Expect = 9e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 108011 TGGAGCCCCCACTCGGGATTGAACCGAGGACCTACTGCTTACAAGGCAGTTGCTCTACCA 108070 ||| ||||||| || | |||||| || ||||||| ||||||||||| |||||||||||| Sbjct 29553 TGGTGCCCCCATTCAGATTTGAACTGAAGACCTACCGCTTACAAGGCGGTTGCTCTACCA 29494 Query 108071 CTGAGCTATA 108080 |||||||||| Sbjct 29493 CTGAGCTATA 29484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 745974976212960