Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq22097 107 2e-18 >seq22097 Length=48055 Score = 107 bits (118), Expect = 2e-18 Identities = 313/477 (66%), Gaps = 20/477 (4%) Strand=Plus/Plus Query 164503 GGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTA 164562 ||||| || ||| | || || ||||| | |||||||||| ||| ||||||||| | Sbjct 40328 GGCTGCAAGCATGTGAAGGGCATTTTGCTCTATGGACCTCCCGGTACCGGTAAAACTCTG 40387 Query 164563 ATGGCTCGATGCATTGCTCAAGCTTTTAAAT---CGCGACCCGTTAAAATTGTTAATGGT 164619 ||||| ||| |||| || | |||||| ||||| ||| || || || |||||| Sbjct 40388 ATGGCCCGACAGATTGG-CACCATGTTAAATGCCCGCGAACCG--AAGATCGTGAATGGT 40444 Query 164620 CCTGA-ATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCA 164678 || | ||| | || ||||||||| ||||| || || || ||||| || |||| Sbjct 40445 CCGCAGATTCTCGA-CAAATATGTGGGTGAATCCGAGGCGAATGTGCGACGTCTGTTCGC 40503 Query 164679 GGAGGCTGAAGAAGAACAAAAGAAAGCAGGTTTAGCTAGTAAATTACATGTTATTGTTTT 164738 ||||| ||||| ||| | ||| || |||| ||| ||| | || | || Sbjct 40504 CGAGGCCGAAGAGGAAGAGAAGCGTCTGGGACCGAATAGTGGATTGCATATCATCATCTT 40563 Query 164739 TGATGAGATAGATGCTCTTTGCAAAAAACGTGG---TG---------ATAATATTATTCA 164786 ||||||||| ||||| ||||||| | ||||| || | | | | || Sbjct 40564 TGATGAGATCGATGCCATTTGCAAGCAGCGTGGCTCTGTGGCGGGCAACAGCGGTGTCCA 40623 Query 164787 TGATGCAGTGGTTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATAT 164846 ||| | ||||| ||||||||||| | ||||| ||||| || || || || || || Sbjct 40624 CGATACCGTGGTGAATCAGTTGCTAACCAAAATCGATGGCGTGGATCAGTTGAACAACAT 40683 Query 164847 TTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGG 164906 | | | | || |||||||| |||| ||| | || ||||| || | || || || || Sbjct 40684 TCTGGTGATTGGCATGACCAATCGACGCGATATGATAGATGAGGCGCTGTTGCGTCCCGG 40743 Query 164907 TCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAAT 164963 || | || | |||| ||||| | || ||| | | | || ||| |||| || Sbjct 40744 ACGTCTTGAGGTCCAAATGGAAATCAGTTTGCCCAATGAGGCGGGTCGCGTTCAGAT 40800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595675704866400