Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq25128 271 2e-67 seq19105 86.0 2e-11 >seq25128 Length=30855 Score = 271 bits (300), Expect = 2e-67 Identities = 1122/1753 (64%), Gaps = 49/1753 (3%) Strand=Plus/Plus Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489 |||||||| | || | ||||| |||||||| ||| | ||| | || || ||||| ||| Sbjct 18410 ATCAATGGCAAAATCGCCGAACGTCCGCAGCACATGCTGATGAGAGTGGCGATTGGAATC 18469 Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTAAGTGCTCGTGTATTC 363549 ||| || || | ||| |||| | || || || || || || | || || Sbjct 18470 CATGGCGAAGACATCGATTCCGCTGTCGAGACTTACAATCTGTTATCGGAACGCTATTTT 18529 Query 363550 ACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGC 363609 ||||| || ||||||| | | ||||| || | ||| |||||||| || || Sbjct 18530 ACGCATGCATCGCCAACGCTATTTGCTGCTGCCACCAATCGTCCCCAGATGTCATCGTGT 18589 Query 363610 TTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGT 363669 || ||||||| |||| |||||||||||| || || || | | | || | ||| Sbjct 18590 TTCCTTCTAACAATGGTTTCCGATTCCATCGAAGGCATTTTCAAGTCCGTCGAGCAGTGT 18649 Query 363670 GCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGT--TCGTGCAC 363727 || | || ||||| || || || ||||| | | || || ||| |||||| Sbjct 18650 GCAATGATCTCCAAATCCGCTGGTGGCATTGGACT--CAATGTGCATTGTATTCGTGCCA 18707 Query 363728 AGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTG 363787 || || | || | ||||| || || ||||| |||| |||||||| | | Sbjct 18708 AGGGCACCTCGATCTGTGGCACTAATGGCACTTCAAATGGTTTGGTGCCCATGCTCAGAG 18767 Query 363788 TGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTG 363847 ||||| | ||| || | || ||||| || ||||| || ||||| ||| || |||| Sbjct 18768 TGTTTAATAATGTGGCTCGTTATGTCGATCAAGGTGGCGGCAAGCGGCCAGGCGCTTTTG 18827 Query 363848 CTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACA 363907 | || || || || ||| ||| ||||||| |||||||| | || ||| || |||| Sbjct 18828 CCATTTACCTGGAACCTTGGCATTCCGATATCTTTGAGTTCTTGGACCTCAAAAAGAACA 18887 Query 363908 CGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATT 363967 |||| || || || | || |||||||| ||||| || | ||| | | || | | Sbjct 18888 CGGGCAAGGAAGAGCACAGAGCTCGTGATCTCTTCTACGCCTTGTGGATACCCGATCTGT 18947 Query 363968 TTATGAAGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAG 364027 |||||||||| ||||| || | || ||||||| || || || || ||| | ||||| | Sbjct 18948 TTATGAAGCGTGTGGAAGCCAATGAGGATTGGTCGCTGTTGTGTCCTCACAAGTGTCCCG 19007 Query 364028 GTCTTTCCGATGTATGGGGTGACGACTAT--GTTGCTCTATACGAAAAGTATGAATCGGA 364085 | | || || ||||| || |||| | | ||| ||||| ||||||||| || Sbjct 19008 GCTTGGAAGACGTTTGGGGGGATGACTTTGAGAAGCTGTATAC--AAAGTATGAGAGCGA 19065 Query 364086 GGGAAAGGC---TCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142 ||| || |||| | ||| ||||| | || |||| |||||| | || || Sbjct 19066 GGGTCGCGCAAATCGTGTG---ATTAAAGCACAAACTCTTTGGTATGCCATTGTTGAATC 19122 Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202 || ||||||| || || || || ||| | | |||||| || |||||| | ||| ||| Sbjct 19123 TCAAGTTGAGACTGGCACTCCGTACATGCTCTTCAAAGACTCTTGCAACAGGAAGAGCAA 19182 Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACAC 364262 |||||| | |||| || || | |||||||| || ||||| ||| ||||||| | Sbjct 19183 TCAGCAGAATGTTGGCACCATCAAATGCAGCAACCTCTGCACCGAAATTGTTGAATATTC 19242 Query 364263 CGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA- 364321 || ||||| |||| |||||| || || | || ||||| || | |||||| | Sbjct 19243 GGCACCCGATGAGATTGCCGTCTGCAATTTGGCATCGATAGCCTTGAATATGTTTGTGAC 19302 Query 364322 --AAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAA 364379 ||| || || || | || | || | || || || | || || | || Sbjct 19303 TTCAGAGAAAACATTCGATTTCAAGAAACTAAAGGAAGTTACTAAAACTGTCACCAGAAA 19362 Query 364380 TCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATAT 364439 | | |||| | || || | ||||| ||||| | || || || || || ||| | Sbjct 19363 TTTGAACAAAATCATTGATATCAATTACTATCCGCTGCCCGAGGCAAAGAAATCCAATTT 19422 Query 364440 GCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACG---TTTTTATGATGCT 364496 | ||||| || ||||| |||| || |||||| | || |||| | || |||||| Sbjct 19423 AAGACATCGTCCCATTGGCATTGGCGTTCAGGGCTTTGCCGACGCCTTAATTCTGATGCG 19482 Query 364497 CAAGATGGCATTTGATTCGCCTGAC---GCTCGTGTT-CTAAATAAGGAGATCTTTGAAA 364552 | | | | ||| | |||| || ||| || || ||| || ||||||| |||| Sbjct 19483 C---TTTCCCTATGA---GAGTGACAAAGC-CGTATTGCTCAATCAGCAGATCTTCGAAA 19535 Query 364553 CAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACT 364612 | || || | || || | || ||||| |||| ||| | || || Sbjct 19536 CCATCTACTATGGTGCCCTTGAGGCCAGTTGTGAGCTGGCTCAAAAGGACGGTCCCTATG 19595 Query 364613 CTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCA 364672 || || | || | || | |||||| | |||| ||| | ||| | | Sbjct 19596 AAACCTACGCTGGTTGTCCGGTGAGCAAGGGAATTCTGCAGTACGATATGTGGGACAAGA 19655 Query 364673 CGCCATCTGTCCGATGGAACTGGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTC 364732 | || | || ||| | ||| | | ||| | || | || ||||||| | Sbjct 19656 CACCCACAAACCTTTGGGATTGGACTGCTCTAAAATTGAAAATCAAAGAGCATGGCGTTA 19715 Query 364733 GCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACA 364792 | ||||| || || || || ||||||||||| |||||||| |||||| | || || | Sbjct 19716 GAAACTCGCTGCTTGTGGCTCCAATGCCCACGGCATCTACTGCCCAGATCATGGGTAATA 19775 Query 364793 ACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAAT 364852 | |||| ||| || |||| ||| || |||| | | || ||| | |||||||| | Sbjct 19776 ATGAGTCCTTTGAGCCGTATACTTCAAACATTTACACCAGGCGCGTTTTGTCCGGAGAGT 19835 Query 364853 TTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACA 364912 | || || ||| | | | | |||| | |||| | | | |||| ||| Sbjct 19836 TCAATGTGGTAAATCATCATTTGTTGCGGGATTTAACCGAACTGGATTTATGGGATGATG 19895 Query 364913 GCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACAT----TCCAGGATTT 364968 ||||||||| | ||||| ||| | ||| || | || ||||| |||| || Sbjct 19896 ACATGAAGAATCAAATCATTGCCAGTCGTGGCTCCATACAAAACATCGAATCCA----TT 19951 Query 364969 CCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTC--TCA 365026 || | || | | | ||||||||||||| |||||||| || | ||| || || Sbjct 19952 CCTCAGGAAGTACGGGATCTTTACAAAACCGTCTGGGAAATCTC--GGTGAAGTCAACCA 20009 Query 365027 TTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCA 365086 | | ||||| || ||||||||||||||||| ||||| || || || ||| ||||| Sbjct 20010 TCAAGATGGCAGCTGATCGCGGTGCTTTTATTGACCAGAGTCAATCATTCAAC--ATTCA 20067 Query 365087 ---TGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCG 365143 || | | |||| || || |||| | |||||||| ||||||| | |||||| | | Sbjct 20068 CGTTGCCGAACCCAA-CTACGGCAAGTTAACATCCATTCATTTCTTCTCGTGGAAGGCAG 20126 Query 365144 GTCTTAAGACAGG 365156 | || |||||||| Sbjct 20127 GCCTCAAGACAGG 20139 >seq19105 Length=237168 Score = 86.0 bits (94), Expect = 2e-11 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 22489 GAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCT-GGAGCATTTTGTGC 22547 |||||| ||||||| ||||||| ||||||||||| ||||| | ||||| ||| | Sbjct 37067 GAACGTATTATTGCTTTTGCTGCTGTTGAAGGCATCTTCTTCAGTGGGAGC-TTTGCATC 37009 Query 22548 AATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAAT 22607 ||||| ||||| || || |||| | ||||||| || || || || || || || || || Sbjct 37008 CATCTTCTGGCTGAAGAAGCGTGGACTTATGCCTGGACTTACATTCTCCAACGAATTGAT 36949 Query 22608 TAGCCGAGATGAGGGTCTTCATACCGATTTTGCG 22641 || ||||| ||||| ||| || |||||| Sbjct 36948 CTCTCGCGATGAAGGTCTGCATTGTGACTTTGCG 36915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1302913508808828