Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq25128 179 3e-40 seq24486 131 2e-25 seq20348 107 2e-18 seq14047 102 8e-17 seq14592 100 3e-16 seq25099 98.7 9e-16 seq18924 95.1 1e-14 >seq25128 Length=30855 Score = 179 bits (198), Expect = 3e-40 Identities = 613/946 (65%), Gaps = 31/946 (3%) Strand=Plus/Minus Query 145055 TGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAG 145114 ||||| || || | ||||| |||| ||| || || | || | ||| || || | Sbjct 19851 TGATTTACCACATTGAACTCTCCGGACAAAACGCGCCTGGTGTAAATGTTTGAAGTATAC 19792 Query 145115 GGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCC 145174 || ||||| ||||| ||||| |||| ||| || || || | ||| |||||||| ||| Sbjct 19791 GGCTCAAAGGACTCATTATTACCCATGATCTGGGCAGTAGATGCCGTGGGCATTGGAGCC 19732 Query 145175 ACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCC 145234 || | | || || | | ||| |||| ||||| | ||||| | | ||||||| Sbjct 19731 ACAAGCAGCGAGTTTCTAACGCCATGCTCTTTGATTTTCAATTTTAGAGCAGTCCAATCC 19672 Query 145235 CATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGG 145294 || || || || || ||||||||| |||||||||| ||| |||| ||| | || Sbjct 19671 CAAAGGTTTGTGGGTGTCTTGTCCCACATATCGTACTGCAGAATTCCCTTGCTCACCGGA 19612 Query 145295 CTGCCTTGAAAGGAACTGTA---ACTGCCCCAAGTTTTG-GCGAGCTCGCAACTCGCCTC 145350 | || ||| || || | || ||||| || ||||| ||||| ||||| Sbjct 19611 CAACCAGCGTAGGTTTCATAGGGACCGTCC----TTTTGAGCCAGCTCACAACTGGCCTC 19556 Query 145351 CAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCT 145410 || || || | || || || ||| || ||| ||||||| | |||| || || Sbjct 19555 AAGGGCACCATAGTAGATGGTTTCGAAGATCTGCTGATTGAGCAATACGGCTTTGTCACT 19496 Query 145411 CTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGAT 145470 ||| || || | ||||| ||| | || || ||||| | ||||| | || | ||| || Sbjct 19495 CTCATAGGGAAAGCGCATCAGAATTAAGGCGTCGGCAAAGCCCTGAACGCCAATGCCAAT 19436 Query 145471 GGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCG---ATAGGATATCGATTACGGTC 145527 ||| |||||| | | ||| || | ||| ||| | ||||| ||| || Sbjct 19435 GGGACGATGTCTTAAATTGGATTTCTTTGCC---TCGGGCAGCGGATAGTAATTGATATC 19379 Query 145528 GATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTC 145587 || ||||| ||||| |||| || || |||| | | | || | || || Sbjct 19378 AATGATTTTGTTCAAATTTCTGGTGACAGTTTTAGTAACTTCCTTTAGTTTCTTGAAATC 19319 Query 145588 AAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAAC 145647 || ||| | || || ||| |||| | ||| ||||| |||||||| || || Sbjct 19318 GAATGTTTTCTC-TGAAGTCACAAACA--TATTCAAGGCTATCGATGCCAAATTGCAGAC 19262 Query 145648 TGCCGTCTCCTCGGCGTCGCTG--TATTGTACGATCTCGGCGCACAAATTGCTACATTTG 145705 || |||| |||| || || | |||| || || |||| ||| | ||||| |||||| Sbjct 19261 GGCAATCTCATCGG-GT-GCCGAATATTCAACAATTTCGGTGCAGAGGTTGCTGCATTTG 19204 Query 145706 ATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTAC 145765 ||||| || | ||| |||||||| || ||||||||||| | ||| ||| ||||||||||| Sbjct 19203 ATGGTGCCAACATTCTGCTGATTGCTCTTCCTGTTGCAAGAGTCTTTGAAGAGCATGTAC 19144 Query 145766 GGTCCGCCAGTCTCCACCTGCGTCTCCAC-----GATAAAACGGTGCAAGTCCTGCGCAC 145820 || ||||||||| || || | || || ||| | | | || || | Sbjct 19143 GGAGTGCCAGTCTCAACTTGAGATTCAACAATGGCATACCAAAGAGTTTGTGCTTTAATC 19084 Query 145821 GCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGG 145880 ||| ||| ||| ||||| || || || | || |||| |||||| | Sbjct 19083 ACACGATTTGC-----GCGACCCTCGCTCTCATACTTTGTATACAGCTTCTCAAAGTCAT 19029 Query 145881 AACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGT 145940 || | || || |||||||||||||| ||||||| ||||||||| | | | Sbjct 19028 CCCCCCAAACGTCTTCCAAGCCGGGACACTTGTGAGGACACAACAGCGACCAATCCTCAT 18969 Query 145941 TGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTA 145986 |||| | || |||| |||||||| ||| || | ||||| ||||| Sbjct 18968 TGGCTTCCACACGCTTCATAAACAGATCGGGTATCCACAAGGCGTA 18923 >seq24486 Length=213816 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||||||| || || | |||||||||||| || |||||||| ||| | Sbjct 88371 CCACCACGCAGACGCAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 88312 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | |||||| || || || || Sbjct 88311 AGAGTGCGGCCATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGATCTGGGGGA 88252 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| || ||||| | ||| | || || | || ||| | Sbjct 88251 ATTCCCTCCTTGTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAGGGCTCCACC 88192 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || | ||||| ||||| || ||||| Sbjct 88191 TCCAAGGTGATGGTCTTGCCAGTCAAGGTTTTCACGAAGATTTGCAT 88145 >seq20348 Length=30608 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | || ||||| || || | || ||||| ||||| || ||||||||| Sbjct 12919 CCACCGCGAAGGCGGAGCACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGGAA 12860 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| || || | |||||||| || |||| |||||||| || || ||||| Sbjct 12859 AGAGTGCGCCCATCTTCCAATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAGGA 12800 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 |||||||||||||| ||| | | || |||| | || | ||||| | | |||| Sbjct 12799 ATTCCTTCTTTGTC-CTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGAC 12741 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | ||| ||||| || || ||||| ||||| || ||||| Sbjct 12740 CTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAACGAAGATTTGCAT 12693 >seq14047 Length=15719 Score = 102 bits (112), Expect = 8e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || || || || || | ||||| ||||||||||| |||||||| Sbjct 15697 CCACCACGTAGTCGGAGGACCAAGTGAAGTGTCGATTCCTTTTGAATATTGTAATCTGAA 15638 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| ||||| ||||||||||| ||| |||| | ||||||||| || || ||| Sbjct 15637 AGAGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGATCTGGGGGG 15578 Query 131128 ATTCCTTCTTTGTC 131141 |||||||||||||| Sbjct 15577 ATTCCTTCTTTGTC 15564 >seq14592 Length=14038 Score = 100 bits (110), Expect = 3e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 51808 ATGTTGCCGAGATCGCCCACGTGTCGCTCGGCGGAGTTGGGTGCGCCGTGGTGTTTGCCA 51867 ||||| || | |||||||| || |||||| | ||||||| || || ||||| Sbjct 7073 ATGTTTCCCAAATCGCCCAGATGACGCTCGTTGTCTGTGGGTGCACCATGCTGTTTCTTG 7014 Query 51868 AGGGGATTAAAGTGCTCGCCGGCGGACGTGCACCCGTTGCTGGTGTCGCCGAACTCGTGC 51927 ||||||||||||| | |||||||| ||||| || || ||| |||||| ||||| ||| Sbjct 7013 TGGGGATTAAAGTGTGCTCCGGCGGATGTGCAGCCATTTGTGGAGTCGCCAAACTCATGC 6954 Query 51928 ACGTGAAAGCCGTGCAGTCC 51947 || |||||||| ||||| || Sbjct 6953 ACATGAAAGCCATGCAGACC 6934 >seq25099 Length=83779 Score = 98.7 bits (108), Expect = 9e-16 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || || || || || | ||||||||| || |||||||| ||||| | |||||| Sbjct 21203 CGGAGGACCAAGTGAAGGGTCGACTCTTTCTGAATGTTATAATCAGAAAGGGTGCGACCA 21262 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| ||||||||||| ||| |||| | ||||||||| || |||||||||||||| || Sbjct 21263 TCCTCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGAGGGATTCCTTCCTTA 21322 Query 131140 TC 131141 || Sbjct 21323 TC 21324 >seq18924 Length=2603740 Score = 95.1 bits (104), Expect = 1e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 51808 ATGTTGCCGAGATCGCCCACGTGTCGCTCGGCGGAGTTGGGTGCGCCGTGGTGTTTGCCA 51867 ||||| || | |||||||| || |||||| | |||| || || || ||||| Sbjct 1814408 ATGTTTCCCAAATCGCCCAGATGACGCTCGTTGTCTGTGGGCGCACCATGCTGTTTCTTG 1814467 Query 51868 AGGGGATTAAAGTGCTCGCCGGCGGACGTGCACCCGTTGCTGGTGTCGCCGAACTCGTGC 51927 ||||||||||||| | |||||||| ||||| || || ||| |||||| ||||| ||| Sbjct 1814468 TGGGGATTAAAGTGTGCTCCGGCGGATGTGCAGCCATTTGTGGAGTCGCCAAACTCATGC 1814527 Query 51928 ACGTGAAAGCCGTGCAGTCC 51947 || |||||||| ||||| || Sbjct 1814528 ACATGAAAGCCATGCAGACC 1814547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471857307183360