Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq16702 114 1e-20 >seq16702 Length=433992 Score = 114 bits (126), Expect = 1e-20 Identities = 201/289 (70%), Gaps = 4/289 (1%) Strand=Plus/Plus Query 37842 TGGAACGCGGCTCAAATTCAGCTTGTGCGCGAGGGTAAGATGCATCAGTATATGCGCATG 37901 |||||| |||| ||| | ||||| || ||||| || |||||| | | || | ||| Sbjct 196496 TGGAACTCGGCGCAATTGCAGCTGGTCAATGAGGGCAAAATGCATGGATTTCTGAGAATG 196555 Query 37902 TATTGGTGCAAGAAAATTTTGGAATGGTCTGATGATGCTCAGACC--GCGCTCAACTACG 37959 |||||| |||||| || | |||||| | || | | |||| | ||| | | || Sbjct 196556 TATTGGGCCAAGAAGATACTTGAATGGACAGAA-ACAC-CAGAGCAGGCGTTGGAGTATA 196613 Query 37960 CCATTTATCTCAATGATAAGTACAGCTTGGACGGGCGTGATCCCAACGGTTACGTCGGCT 38019 ||| | || || || || ||||| |||| || ||||||||||| ||||| || |||| Sbjct 196614 GCATATTGCTGAACGACAAATACAGTCTGGATGGCCGTGATCCCAATGGTTATGTGGGCT 196673 Query 38020 GTTTGTGGTCTATATGCGGGCTACACGATAGAGCCTGGCGCGAGATTCCCATTTACGGCA 38079 | |||||||| | | || | || |||| || ||| ||| | |||| | ||||| Sbjct 196674 GCATGTGGTCTGTCGGGGGTATCCATGATAACGCATGGAAGGAGCGTGCCATATTCGGCA 196733 Query 38080 AGATTCGGTACATGAACTACAACGGATGTGTTAGGAAGTTTAATGTTAA 38128 ||||||| || |||||||| | |||||| | || ||| ||||||| Sbjct 196734 AGATTCGCTATATGAACTATCAAGGATGTAAACGAAAATTTGATGTTAA 196782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396934867775908