Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq25128 113 4e-20 >seq25128 Length=30855 Score = 113 bits (124), Expect = 4e-20 Identities = 263/396 (66%), Gaps = 8/396 (2%) Strand=Plus/Plus Query 93928 CCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGG----CCGACTCCATCTCCGGAAT 93983 || |||||||| ||||||||||| | ||||| | |||| |||||| || || Sbjct 18572 CCCCAGATGTCATCGTGTTTCCT----TCTAACAATGGTTTCCGATTCCATCGAAGGCAT 18627 Query 93984 TTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAG 94043 |||| | | || || | ||||| | ||||| |||| ||| || || || || ||| Sbjct 18628 TTTCAAGTCCGTCGAGCAGTGTGCAATGATCTCCAAATCCGCTGGTGGCATTGGACTCAA 18687 Query 94044 TGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGG 94103 ||| || | ||||||| ||| ||| ||| | || || |||||||| || || || Sbjct 18688 TGTGCATTGTATTCGTGCCAAGGGCACCTCGATCTGTGGCACTAATGGCACTTCAAATGG 18747 Query 94104 CCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGG 94163 | || || |||||| | || || || || | ||| || || || || || ||||| || Sbjct 18748 TTTGGTGCCCATGCTCAGAGTGTTTAATAATGTGGCTCGTTATGTCGATCAAGGTGGCGG 18807 Query 94164 GAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTT 94223 | | || || |||| || | || || || || ||||| | || | | || Sbjct 18808 CAAGCGGCCAGGCGCTTTTGCCATTTACCTGGAACCTTGGCATTCCGATATCTTTGAGTT 18867 Query 94224 CATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGC 94283 | | ||||| ||||||| ||||| || | | || || | || ||||||||||| Sbjct 18868 CTTGGACCTCAAAAAGAACACGGGCAAGGAAGAGCACAGAGCTCGTGATCTCTTCTACGC 18927 Query 94284 TCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGA 94319 | ||| | || || || |||||||| || || || Sbjct 18928 CTTGTGGATACCCGATCTGTTTATGAAGCGTGTGGA 18963 Score = 86.0 bits (94), Expect = 6e-12 Identities = 104/141 (74%), Gaps = 3/141 (2%) Strand=Plus/Plus Query 95071 aTCAAA---CACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACG 95127 |||||| || || || | |||| ||||||||||||| || ||||||||||| || || Sbjct 19697 ATCAAAGAGCATGGCGTTAGAAACTCGCTGCTTGTGGCTCCAATGCCCACGGCATCTACT 19756 Query 95128 GCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGG 95187 || |||||| | || || || ||||| || || || | || || ||| | |||| |||| Sbjct 19757 GCCCAGATCATGGGTAATAATGAGTCCTTTGAGCCGTATACTTCAAACATTTACACCAGG 19816 Query 95188 CGGGTGCTCGCCGGGGAATTC 95208 || || | |||| || ||| Sbjct 19817 CGCGTTTTGTCCGGAGAGTTC 19837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494560225809840