Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_011335.1 Length=119343 Score E Sequences producing significant alignments: (Bits) Value seq21315 93.3 3e-14 >seq21315 Length=59093 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 108466 TGGGTGCTCGATCACAGGGTTCACCACAAGTACTCTGACACGACGGCCGACCCACACAAC 108525 ||||||| |||||| | || || || |||| ||| || ||| ||||| || ||||| Sbjct 6232 TGGGTGCGCGATCATCGTGTGCATCATAAGTTCTCCGAAACGGATGCCGATCCTCACAAT 6291 Query 108526 GCCAACAGGGGGTTCTGGTTCTCGCACGTGGGATGGCTCATGATGACCAAGGACCCCGAC 108585 ||||| | || |||| ||||||||||| || ||||| |||||| ||| | || || Sbjct 6292 GCCAATCGTGGCTTCTTCTTCTCGCACGTTGGCTGGCTGATGATGCTGAAGCATCCGGAT 6351 Query 108586 GTGATCTCGGCCGGTC-GAAAAATGGACATGACGGACATATACTCCGATCCGGTGGTAGT 108644 ||| | || | || | || | || || ||||| ||||| ||||||| ||||| Sbjct 6352 GTG-TTGCGCCGGGGCAGACAGATCGATATGACTGACATTGTGGCCGATCCTGTGGTGCA 6410 Query 108645 GTGGCACACCAAGTACTTTATTCCTCTTAAAATTTTGCTCTGTTTTGT 108692 || || |||||||| |||| || || | || ||||||| || Sbjct 6411 GTTCCATCAGAAGTACTTCATTCTGCTAAAGGTCATGTTCTGTTTCGT 6458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381650178632976