Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq20348 122 6e-23 seq14592 89.7 4e-13 >seq20348 Length=30608 Score = 122 bits (134), Expect = 6e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 14980 GTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGTTTGCCA 15039 ||||| |||||||| || ||||||||| ||| | | | | ||||| ||||| ||||| Sbjct 12889 GTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTGCGCCCATCTTCCAATTGCTTGCCG 12830 Query 15040 GCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTGCTTTTT 15099 || | |||||||||||||| || ||||||||||| ||||| ||| ||| ||| Sbjct 12829 GCAAAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTG 12770 Query 15100 ACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTCAGAGTT 15159 ||| |||| || ||||| ||| || || | || ||||| ||||| || || ||| Sbjct 12769 ACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTACCCGTGAGGGTT 12710 Query 15160 TTTACAAAAATTTGCAT 15176 || || || |||||||| Sbjct 12709 TTAACGAAGATTTGCAT 12693 >seq14592 Length=14038 Score = 89.7 bits (98), Expect = 4e-13 Identities = 230/343 (67%), Gaps = 13/343 (4%) Strand=Plus/Minus Query 90436 ATGACGCCACAGCCCAGTCGCCCTCCGGAATTTCCTGTAATCTTGCTCAACGGATGATTG 90495 |||||||| ||||| | || |||| | |||||| || | ||||||||| ||| | Sbjct 7259 ATGACGCCGCAGCCAATGCGTGCTCCAGCATTTCCAGTTGTTTTGCTCAACTCATG-TCC 7201 Query 90496 GTCAGACCCAAG-TCGTCTTTGTTTGTGTGTACGACCAAACTGCGTCCGAGAATGCTGTA 90554 | ||||| || || | | ||| || |||||||||||||| | ||||| | Sbjct 7200 ACCTTTGCCAAGATCATCGGGATCGGCGTGGACAACCAAACTGCGTCCAATGATGCTATT 7141 Query 90555 AGGCCCAAAAAGGCTAATAACGTTATCTATAATATCGATTTCAGTTAGAGCGTTGGCGGT 90614 | ||||| || |||| | ||| || || ||||| ||| | | |||| Sbjct 7140 GGCACCAAAGAGCGTAATGTGGCAATCGCAAAAATTGATTTTTGTT-----GCTC-CGGT 7087 Query 90615 TTTTGCG---TTAATATTTCCTAAATCGCCAACGTGTCGTTCAATGGCATTTGGTGCGCC 90671 | || || || ||||| |||||||| | || || || || | | ||||| || Sbjct 7086 TCCCTCGACATTGATGTTTCCCAAATCGCCCAGATGACGCTCGTTGTCTGTGGGTGCACC 7027 Query 90672 GTGATCGCGTCCGGTGGG-ATTAAAATGTTCGCCCGCAGATGTGCAACCGTTAGTTGTGT 90730 || | | || ||||| |||||| ||| | || || |||||||| || || || | || Sbjct 7026 ATGCT-GTTTCTTGTGGGGATTAAAGTGTGCTCCGGCGGATGTGCAGCCATTTGTGGAGT 6968 Query 90731 CACCAAATTCGTGCACATGAAAACCGTGCAAACCTTTTGGTAA 90773 | ||||| || ||||||||||| || |||| |||||| | ||| Sbjct 6967 CGCCAAACTCATGCACATGAAAGCCATGCAGACCTTTCGATAA 6925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357277209486890