Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq24486 149 7e-31 seq20348 122 1e-22 >seq24486 Length=213816 Score = 149 bits (164), Expect = 7e-31 Identities = 165/220 (75%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 ||||| ||||| ||||| || |||||| ||||| ||||||||||| |||||||| | Sbjct 88360 ACGCAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCC 88301 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 || || ||||||||||| ||||| |||| ||||| || || | || | | |||||| Sbjct 88300 ATCCTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGATCTGGGGGAATTCCCTCCTT 88241 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557 |||| |||||| ||||| || | | ||||| | ||||| |||| ||||| Sbjct 88240 GTCCTGGATCTTAGCCTTGACATTCTCGATGGTGTCAGAGGGCTCCACCTCCAAGGTGAT 88181 Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTG 46597 ||| ||||| |||| ||||| || ||||||||||||||| Sbjct 88180 GGTCTTGCCAGTCAAGGTTTTCACGAAGATTTGCATTTTG 88141 >seq20348 Length=30608 Score = 122 bits (134), Expect = 1e-22 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||||| ||||||||| ||| |||||||||||||| ||||| ||||||||| | || || Sbjct 12902 CACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTGCGCCCATCTTC 12843 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 | ||||||||||| || ||||| ||||| || || | || | | || |||||| Sbjct 12842 CAATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTG 12783 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||||| |||| | | | || || || ||| || || | |||||||| || Sbjct 12782 AATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTT 12723 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||||| || |||||||| ||||||||||| Sbjct 12722 ACCCGTGAGGGTTTTAACGAAGATTTGCAT 12693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565052196340080