Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq20348 98.7 7e-16 >seq20348 Length=30608 Score = 98.7 bits (108), Expect = 7e-16 Identities = 155/221 (70%), Gaps = 1/221 (0%) Strand=Plus/Minus Query 39505 CGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCA 39564 || || ||||| ||||| || |||||||| ||||| ||||||| | | ||| || Sbjct 12907 CGGAGCACCAAGTGCAATGTAGACTCTTTTTGGATATTGTAATCGGAAAGAGTGCGCCCA 12848 Query 39565 TCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTG 39624 || |||||||| || ||| |||| || |||||||| ||||| | || | ||||||||| Sbjct 12847 TCTTCCAATTGCTTGCCGGCAAAGATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTG 12788 Query 39625 TCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATT 39684 || || || ||| | | | | || || | ||| || || | ||| || Sbjct 12787 TCCTGAATCTTGGCTTTGACATTTTCGATGGTATCCGACGGTTCGACCTCAAGAGTGATG 12728 Query 39685 GTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT-GTCGT 39724 || |||||||| | ||||| |||||||| ||||| ||||| Sbjct 12727 GTCTTACCCGTGAGGGTTTTAACGAAGATTTGCATCGTCGT 12687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347258028575282