Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq18360 141 4e-28 seq20348 125 3e-23 seq20123 122 3e-22 seq8415 100 1e-15 seq18684 93.3 2e-13 seq18341 91.5 6e-13 seq25099 89.7 2e-12 >seq18360 Length=14482 Score = 141 bits (156), Expect = 4e-28 Identities = 350/528 (66%), Gaps = 6/528 (1%) Strand=Plus/Minus Query 451082 AATGCCAAAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGAT 451141 |||||||| ||||| || | ||||| ||||||||||||||||| | ||| ||||| | Sbjct 6762 AATGCCAAGAACACGGTTTTCGATGCGAAACGTTTAATTGGCCGCAAGTACGATGACCAG 6703 Query 451142 ACTGTACAAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCC 451201 | |||| | || || || ||| | || | || | || ||||| Sbjct 6702 AAGATACAGGAGGATCTCAAGCACTGGCCTTTCAAGGTCATCAACGATGGTGGCAAGCCG 6643 Query 451202 TATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCT 451261 | ||| | || | | || || ||| | ||| ||||||||| ||||| | || Sbjct 6642 AAAATTGAGGTCGAGTTCAAGGGGGAATCGAAACGTTTTGCTCCCGAAGAGGTCAGCTCC 6583 Query 451262 ATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGAT 451321 ||||| || || |||||| || | || || ||| | || | || | ||| Sbjct 6582 ATGGTGCTGACCAAAATGCGCGAGATCGCTGAGGTTTATCTGGGGGCCAAGGTGAAGGAT 6523 Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || || || || || || |||||||||||||| | || || || ||||| |||||||| Sbjct 6522 GCCGTCATCACAGTGCCAGCTTATTTCAATGACTCGCAGCGTCAGGCAACCAAAGATGCC 6463 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 ||| |||||||| ||||||| || || ||||| ||||| || |||||||||||| | Sbjct 6462 GGATCCATTGCTGGCCTAAATGTGCTGCGCATTATCAATGAGCCGACAGCAGCTGCTTTG 6403 Query 451442 GCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTT 451501 || ||||| || ||| || | ||| || || ||| | || | |||||||| Sbjct 6402 GCCTATGGCCT-GGACAAGAATCTGAA--AGGCGAGCGCAATGTGTTGATCTTTGATTTG 6346 Query 451502 GGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG---GGTATTTGAAGTA 451558 ||||| || || |||| || |||| | ||||| || || | | || || || Sbjct 6345 GGTGGCGGCACCTTTGATGTGTCCATACTCACCATTGACGAGGGCTCGCTGTTCGAGGTG 6286 Query 451559 AAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 ||||| || || ||||| ||||| || || || || |||| ||| Sbjct 6285 AAGGCCACAGCCGGCGATACACATCTGGGTGGCGAGGACTTTGACAAT 6238 >seq20348 Length=30608 Score = 125 bits (138), Expect = 3e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||||||||| || || ||||| || || |||||||| || ||| | || Sbjct 12693 ATGCAAATCTTCGTTAAAACCCTCACGGGTAAGACCATCACTCTTGAGGTCGAACCGTCG 12752 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| ||| | | ||| || ||||| || || |||||||||||||| |||||| Sbjct 12753 GATACCATCGAAAATGTCAAAGCCAAGATTCAGGACAAAGAAGGAATTCCTCCAGATCAA 12812 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || ||||| || || | || || ||| | |||||||| | ||| | | ||||| ||| Sbjct 12813 CAGCGTTTGATCTTTGCCGGCAAGCAATTGGAAGATGGGCGCACTCTTTCCGATTACAAT 12872 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | || || | ||| | ||||| || Sbjct 12873 ATCCAAAAAGAGTCTACATTGCACTTGGT 12901 >seq20123 Length=68898 Score = 122 bits (134), Expect = 3e-22 Identities = 336/509 (66%), Gaps = 7/509 (1%) Strand=Plus/Plus Query 451103 GATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAAAAAGAGAAAAAA 451162 |||||||||||||| ||||| || | || ||||||| || || || | || || Sbjct 6582 GATGCTAAACGTTTGATTGGACGCAAATACGATGATGCGACGGTGCAGAGTGATCTTAAG 6641 Query 451163 TTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTCAAGTAAATTATAAA 451222 || | | ||| || | | || |||||||| |||| || | | ||| Sbjct 6642 CACTGGCCCTTTGAGGTCATCTCGGATAATGGAAAGCCACGGATTCGTGTGGAGTTTAAG 6701 Query 451223 GGTGAAACTAAAA-CTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAA 451281 || || | || | ||| | | || || ||| | || || ||||| || || |||||||| Sbjct 6702 GGCGAGAAGAAGAGCTTCTAC-CCAGAGGAAGTCTCCTCGATGGTGCTCACCAAAATGAA 6760 Query 451282 AGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGC 451341 || || || ||| |||| | ||| || || ||||| || | || || ||||| Sbjct 6761 GGAGACCGCCGAAGCATATCTGGGTGGCGTTGTCACCGATGCCGTTGTCACGGTGCCCGC 6820 Query 451342 TTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAA 451401 ||||||||||| | || || || || || |||||||| || ||||| || | || Sbjct 6821 CTATTTCAATGACTCGCAGCGCCAGGCGACCAAAGATGCGGGCGCCATTGCCGGACTCAA 6880 Query 451402 TGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATC 451461 ||| || || || || || ||||| ||||| || || | || ||||| || ||| || | Sbjct 6881 TGTGCTGCGCATCATCAACGAACCGACAGCGGCAGCCATTGCCTATGGCCT-GGACAAGC 6939 Query 451462 A--AAAGAAACA--GAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATG 451517 | | || | || | || ||| | | | |||||||| || || || ||| | Sbjct 6940 ACGACAGCAGCAAGGGGGAGCGTAATGTGCTCATTTTTGATTTGGGAGGTGGCACTTTCG 6999 Query 451518 ATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATA 451577 || || || || | ||||| ||||| | ||||| || ||||| ||| || || | Sbjct 7000 ATGTCTCGGTGCTCACCATTGAGGATGGCATCTTTGAGGTGAAGGCCACCGCCGGCGACA 7059 Query 451578 CTCATCTAGGAGGTGAAGATATTGATAAT 451606 | ||||| || |||||||| || || ||| Sbjct 7060 CGCATCTGGGCGGTGAAGACATCGACAAT 7088 >seq8415 Length=34126 Score = 100 bits (110), Expect = 1e-15 Identities = 147/207 (71%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 ||||| || | ||||| |||||||||||||| || || || ||||| | Sbjct 8669 ATTTCCGCTTTCGTTCTGGGCAAAATGAAAGAAACCGCCGAGGCGTACCTTGGTGAAAAA 8728 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || || | || || || || ||||| ||||| || |||||||| || || || || || Sbjct 8729 GTGACGCAGGCCGTGATCACGGTTCCGGCTTACTTTAATGATGCCCAGCGTCAGGCGACC 8788 Query 451373 AAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCA 451432 ||||||||||| | |||||| ||| | | || || || || || || ||||| || || Sbjct 8789 AAAGATGCAGGCCGTATTGCCGGTCTTGAAGTCCTGCGTATCATCAACGAACCGACGGCT 8848 Query 451433 GCTGCTCTAGCATATGGACTAGGAAAA 451459 ||||| || || ||||| | |||||| Sbjct 8849 GCTGCCCTTGCCTATGG-CATGGAAAA 8874 >seq18684 Length=130150 Score = 93.3 bits (102), Expect = 2e-13 Identities = 241/366 (66%), Gaps = 6/366 (2%) Strand=Plus/Minus Query 451238 TTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAA 451297 |||||||| ||||| || || | ||||| | || ||||| ||||| || ||| Sbjct 74620 TTTGCTCCCGAAGAGATCTCCGCCATGGTGTTGGGCAAGATGAAGGAAACCGCTGAAGCC 74561 Query 451298 TATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCA 451357 ||| | || || || |||| || | || || || || || ||||| ||||| Sbjct 74560 TATCTGGGCAAGAAGGTCACACATGCCGTTGTCACAGTGCCAGCATACTTCAACGATGCT 74501 Query 451358 CAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATT 451417 || || || || || || ||||| || ||||| || | | || | || || || Sbjct 74500 CAGCGTCAGGCGACCAAGGATGCCGGTGTCATTGCCGGACTCCAGGTGATGCGTATCATC 74441 Query 451418 AATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaa 451477 ||||| || || || |||||| | || || || || ||| || | || | ||||||| Sbjct 74440 AATGAGCCCACGGCGGCTGCTATTGCCTACGGTCT-GGACAAGAAGGAGGGAGAGAAGAA 74382 Query 451478 aaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATT 451537 | | || || || ||||| ||||| || ||| ||| || | || | ||| Sbjct 74381 -----TGTGTTGGTCTTCGATTTGGGTGGCGGTACTTTCGATGTCTCCCTGCTGACCATT 74327 Query 451538 GAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 || | || || || || || ||| |||||||||||||| ||| | || ||||||||| Sbjct 74326 GATAACGGTGTCTTCGAGGTGGTGGCCACCAATGGTGATACCCATTTGGGCGGTGAAGAT 74267 Query 451598 ATTGAT 451603 | ||| Sbjct 74266 TTCGAT 74261 >seq18341 Length=268721 Score = 91.5 bits (100), Expect = 6e-13 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 451320 ATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATG 451379 |||| || |||||||||||||||| ||||| ||| | || || || || || || |||| Sbjct 181236 ATGCTGTGGTTACTGTTCCCGCTTACTTCAACGATTCGCAGCGTCAGGCTACCAAGGATG 181177 Query 451380 CAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTC 451439 | || || |||||||| | ||||| || || | || || || || ||||| ||||||| Sbjct 181176 CTGGTCAAATTGCTGGCCTGAATGTGCTGCGTGTAATCAACGAGCCCACAGCCGCTGCTC 181117 Query 451440 TAGCATATGG 451449 | || || || Sbjct 181116 TGGCTTACGG 181107 >seq25099 Length=83779 Score = 89.7 bits (98), Expect = 2e-12 Identities = 134/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 391071 CTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATTAAA 391130 ||||| || || || || || || || || ||| | ||||||| |||||| | | || Sbjct 21398 CTGACCGGAAAGACCATCACCCTGGAAGTAGAACCTTCTGATACCATTGAGAATGTGAAG 21339 Query 391131 CAA--AAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAG 391188 || || ||||||||||||||||| ||||| ||||| || ||| | || ||| | | Sbjct 21338 NGGCCAAGATCCAAGATAAGGAAGGAATCCCTCCAGATCAGCAGCGTCTCATCTTCGCCG 21279 Query 391189 GGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACAC 391248 | || || || || ||||| | || | | |||||||| ||| | || || | || | Sbjct 21278 GCAAGCAGCTGGAGGATGGTCGCACCCTTTCTGATTATAACATTCAGAAAGAGTCGACCC 21219 Query 391249 TTCACTTAGT 391258 ||||||| || Sbjct 21218 TTCACTTGGT 21209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975051277690232