Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq25128 159 4e-34 >seq25128 Length=30855 Score = 159 bits (176), Expect = 4e-34 Identities = 591/913 (65%), Gaps = 25/913 (3%) Strand=Plus/Plus Query 112086 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 112145 || |||||||||| ||| | ||||| || ||||| || |||||| | || || | | | Sbjct 18911 CGTGATCTCTTCTACGCCTTGTGGATACCCGATCTGTTTATGAAGCGTGTGGAAGCCAAT 18970 Query 112146 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGT---GGGT 112202 | ||||||| || || ||||| ||||| ||||| || || | ||| ||| Sbjct 18971 GAGGATTGGTCGCTGTTGTGTCCTCACAAGTGTCCCGG---CTTGGAAGACGTTTGGGGG 19027 Query 112203 GAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCGACGGTG 112262 || || ||||| || || |||||||| ||| || |||| || | | | | Sbjct 19028 GATGACTTTGAGAAGCTGTATACAAAGTATGAGAGCGAGGGTCGCGCAAATCGTGTGATT 19087 Query 112263 CCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAT 112322 ||| | | ||| | || ||| | | |||||| |||||||| || || || Sbjct 19088 AAAGCACAAACTCTTTGGTATGCCATTGTTGAATCTCAAGTTGAGACTGGCACTCCGTAC 19147 Query 112323 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 112382 ||||| | ||||||| | || ||| ||||| ||||| ||||| | || ||||| Sbjct 19148 ATGCTCTTCAAAGACTCTTGCAACAGGAAGAGCAATCAGCAGAATGTTGGCACCATCAAA 19207 Query 112383 AGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 112442 | ||||||||| || ||||| | |||| | | | ||||||| || || || Sbjct 19208 TGCAGCAACCTCTGCACCGAAATTGTTGAATATTCGGCACCCGATGAGATTGCCGTCTGC 19267 Query 112443 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTAT 112502 || | ||||| || || | | || |||| | |||||| || |||| |||| Sbjct 19268 AATTTGGCATCGATAGCCTTGAATATGTTTGTGACTTCAGAGAAAA---CATTCGATTTC 19324 Query 112503 GAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGATAGA 112562 | ||||| | |||||||| ||||||||||| | ||| | |||| | | ||||||| Sbjct 19325 AAGAAACTAAAGGAAGTTACTAAAACTGTCACCAGAAATTTGAACAAAATCATTGATATC 19384 Query 112563 AATTTTTACCCCGTTG--AGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGTC 112620 |||| || ||| || || || ||||| ||| | ||||| ||||| ||||| Sbjct 19385 AATTACTA-TCCGCTGCCCGA-GGCAAAGAAATCCAATTTAAGACATCGTCCCATTGGCA 19442 Query 112621 TCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGACG 112680 | || || || || | || || | || ||||| ||| | | ||| ||| Sbjct 19443 TTGGCGTTCAGGGCTTTGCCGACGCCTTAATTCTGATGCGCTTTCCCTATGAGAGTGACA 19502 Query 112681 AAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCGA 112740 |||| ||||| || || || || || || || | | || |||||||| | Sbjct 19503 AAGCCGTATTGCTCAATCAGCAGATCTTCGAAACCATCTACTATGGTGCCCTTGAGGCCA 19562 Query 112741 GTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCAC 112800 ||| ||| |||| | || ||||| |||||||||| | |||| ||| | | | Sbjct 19563 GTTGTGAGCTGGCTCAAAAGGACGGTCCCTATGAAACCTACGCTGGTTGTCC-GGTGAGC 19621 Query 112801 AAGGG-GTGCTTCAATTTGATATGTGGGA-AGGTGA--GACCAAGCTTCACTACGACTGG 112856 ||||| | || || | ||||||||||| | | | || || ||| | || ||| Sbjct 19622 AAGGGAATTCTGCAGTACGATATGTGGGACAAGACACCCACAAACCTT---TGGGATTGG 19678 Query 112857 GACGCTCTCAA--GGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCAC 112914 ||||| || ||| ||||| ||| | || || | ||| || | |||| | Sbjct 19679 ACTGCTCTAAAATTGAA--AATCAAAGAGCATGGCGTTAGAAACTCGCTGCTTGTGGCTC 19736 Query 112915 CAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACA 112974 ||||||| || || || || || || ||| ||||||||||||| | |||||| || || | Sbjct 19737 CAATGCCCACGGCATCTACTGCCCAGATCATGGGTAATAATGAGTCCTTTGAGCCGTATA 19796 Query 112975 CGACGAACATCTA 112987 | | ||||| || Sbjct 19797 CTTCAAACATTTA 19809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620537911934880