Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq25128 109 6e-19 seq18322 89.7 6e-13 seq13822 87.8 2e-12 >seq25128 Length=30855 Score = 109 bits (120), Expect = 6e-19 Identities = 575/909 (63%), Gaps = 23/909 (3%) Strand=Plus/Minus Query 105935 TAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 105994 || ||||| | || || || |||||| | ||||||||||||| ||| || || || || Sbjct 19809 TAAATGTTTGAAGTATACGGCTCAAAGGACTCATTATTACCCATGATCTGGGCAGTAGAT 19750 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || |||||||| |||| | || ||| | || || | || ||||| ||| Sbjct 19749 GCCGTGGGCATTGGAGCCACAAGCAGCGAGTTTCTAACGCCATGCTCTTTGATT--TTCA 19692 Query 106055 --TTGAGAACATCCCAGTCGTA--GTTGAGCTTGGTTTCACCTTCCCACATATCAAATTG 106110 || ||| || ||| || | | | | | ||| || | |||||||||| | || Sbjct 19691 ATTTTAGAGCAGTCCAATCCCAAAGGTTTG-TGGGTGTCTTGT-CCCACATATCGTACTG 19634 Query 106111 AAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGC 106170 || | || | | | ||| |||| | | || ||||||| ||| | || ||| Sbjct 19633 CAGAATTCCCTTGCTCACCGGACAACCAGCGTAGGTTTCATAGGGACCGTCCTTTTGAGC 19574 Query 106171 CAATTCACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCAT 106230 || ||||| || ||||| |||| | | || |||||||| ||||| | ||| | Sbjct 19573 CAGCTCACAACTGGCCTCAAGGGCACCATAGTAGATGGTTTCGAAGATCTGCTGATTGAG 19514 Query 106231 CTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACC 106290 | ||||| || ||| | | |||| || ||| || | || || | || Sbjct 19513 CAATACGGCTTTGTCACTCTCATAGGGAAAGCGCATCAGAATTAAGGCGTCGGCAAAGCC 19454 Query 106291 TTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGA---CTTTCGCGCAGTCTCAAC 106347 ||||| || | ||||| || | |||| | ||| || |||| | | | | | Sbjct 19453 CTGAACGCCAATGCCAATGGGACGATGTCTTAAATTGGATTTCTTTGCCTCGGGC---AG 19397 Query 106348 GGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC 106407 ||||| |||| | ||||||| | ||| | |||| |||| ||| | || || | ||| Sbjct 19396 CGGATAGTAATTGATATCAATGATTTTGTTCAAATTTCTGGTGACAGTTTTAGTAACTTC 19337 Query 106408 ATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGAT 106467 | ||||| | |||| || || ||||| | | ||| || | | ||| || Sbjct 19336 CTTTAGTTTCTTGAAATCGAATGTTT---TCTCTGAAGTCACAAACATATTCAAGGCTAT 19280 Query 106468 TGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACA 106527 |||||||||||||| || || ||||||| | | || || | |||||| || || Sbjct 19279 CGATGCCAAATTGCAGACGGCAATCTCATCGGGTGCCGAATATTCAACAATTTCGGTGCA 19220 Query 106528 CAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATC 106587 | |||| | || || || || | ||||| || || ||||| ||||||| | || Sbjct 19219 GAGGTTGCTGCATTTGATGGTGCCAACATTCTGCTGATTGCTCTTCCTGTTGCAAGAGTC 19160 Query 106588 CTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCACAC 106647 ||| |||||||||| || || || ||||| || || | | ||| || | ||| | Sbjct 19159 TTTGAAGAGCATGTACGGAGTGCCAGTCTCAACTTGAGATTCAACAATGGCATACCAAAG 19100 Query 106648 ATCGGCGGCTGGTACAATGGC---GTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAG 106704 | | || | ||| | || || || ||||| ||| |||||||| || || Sbjct 19099 A---GTTTGTGCTTTAATCACACGATTTGCGCGACCCTCGCTCTCATACTTTGTATACAG 19043 Query 106705 GGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAG 106764 ||||| || || ||| |||| | || || ||||| ||||| || || Sbjct 19042 CTTCTCAAAGTCATCCCCCCAAACGTCTTCCAAGCCGGGACACTTGTGAGGACACAACAG 18983 Query 106765 AGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGA 106824 ||||| | || | || || |||||||| || || || || ||||||| || | Sbjct 18982 CGACCAATCCTCATTGGCTTCCACACGCTTCATAAACAGATCGGGTATCCACAAGGCGTA 18923 Query 106825 AAAGAGATC 106833 |||||||| Sbjct 18922 GAAGAGATC 18914 >seq18322 Length=84725 Score = 89.7 bits (98), Expect = 6e-13 Identities = 236/354 (67%), Gaps = 11/354 (3%) Strand=Plus/Plus Query 169185 CCCTTGATGTGAGAACCATCATTATCGGCATCTGTCATAATCATAAGACGACCATAGCGA 169244 || || |||||||||||||| | ||| ||| ||||| ||||| | ||||||||| Sbjct 72340 CCTTTAATGTGAGAACCATCCTGATCCTGATCAGTCATGATCATTACTTTACCATAGCGC 72399 Query 169245 AGT---TCAGAAACATCT-TGGT---AGTCTTTTCCTTGT--TGAAGACCCAAGATCTTC 169295 ||| | || |||| |||| | ||| | || | || | || | || || Sbjct 72400 AGTGTCTTTAAATCATCCATGGTTAAATACTTCTTTTTATACTGCAATCCAATAATTTTG 72459 Query 169296 TTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGCCACTGAAGCGTCGCGGACATTC 169355 ||| | ||||| ||| ||| || |||||| | ||| || ||||| || || Sbjct 72460 CAGAGGTTGTTGATCTCAGCGTTCTCGGTTAGCTGTTTGAATGATGCTTCGCGCACGTT- 72518 Query 169356 TTACACTTC-CCACGGAGAGGAAAGACGCCATAGTGATCACGTCCAACGACGGAGAGACC 169414 | ||| || || || || |||||||||||||| | | || |||| ||| || || Sbjct 72519 TAACAATTTACCGCGCAGTGGAAAGACGCCATAATAGTTGCGACCAATGACACCTAGGCC 72578 Query 169415 CGCGACCGCAAGGGTTTTCGCTGAATCACCCTCCGTGACAATGAGGGTACACTTTCCAGA 169474 | ||| || | | ||| ||||| || ||||| |||| || || ||||| || || Sbjct 72579 AGAGACAGCTAAAGATTTGGCTGAGTCTCCCTCGGTGAGGATAAGAGTACAATTCAATGA 72638 Query 169475 TTGCGCCGTACCCGCCTTGTTTGCGTCGTCCAACTTGGGAATACCAGTAATTTT 169528 | | || ||||||| ||| || || |||||||||||||| || | ||||| Sbjct 72639 ATTCTTTGTGCCCGCCTCGTTGGCATCTTCCAACTTGGGAATTCCCTTGATTTT 72692 Score = 86.0 bits (94), Expect = 7e-12 Identities = 172/251 (69%), Gaps = 8/251 (3%) Strand=Plus/Plus Query 168470 ATCCTTACCACCCATGAGACGCGTACCAAATTGACCACACGGTTCAAGAAGGTTAATGTT 168529 ||| || ||||| ||||||| ||||| |||||||| | || || | | |||||||| Sbjct 71531 ATCTTTTCCACCGGTGAGACGAGTACCGAATTGACCGCGTGGCTCTAACAAATTAATGTT 71590 Query 168530 GTTTGAACCCGTGTAGTCGTTTGCCAACTTAACAATCGT-GTCCGCTAAGGATACTTCAC 168588 ||| || ||| |||| | ||||| || ||||| || | || | || ||||||| Sbjct 71591 GTTCGATCCCACATAGTTCTGCGCCAAATTCACAATGGTCATTTGC-AGCGAGACTTCAC 71649 Query 168589 CATGGTGGTACGCAGACTTGTCCGCGACATATGCCGCCAGTTGTGCCACCTTCATTTCAT 168648 |||| || |||| ||| | || || || | ||| ||| || || ||||| | |||| Sbjct 71650 CATGATGATACGATGACATTTCGGCAACGGAACCCGACAGCTGGGCAACCTTAACTTCAC 71709 Query 168649 CCTTGAGATT---CTTATGGAAGCAAGCATACATCACTTTCCTCTGTGAAGGCTTGAGAC 168705 |||| || |||| || || | | |||| || |||| ||| |||||| | | Sbjct 71710 GCTTGTCGTTACGCTTA---AAACACGTAAACATAACCTTCCGCTGACCAGGCTTTAAGC 71766 Query 168706 CATCCGCCATA 168716 |||| ||||| Sbjct 71767 CATCTACCATA 71777 >seq13822 Length=124548 Score = 87.8 bits (96), Expect = 2e-12 Identities = 330/505 (65%), Gaps = 26/505 (5%) Strand=Plus/Plus Query 9188 CTTACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGT 9247 || ||| ||||| || || ||||| || || || || || | || || || || Sbjct 47544 CTGACGGTCAAAACGGCCGGGACGCAGCAGAGCCGGGTCCAGCACGTCCGGACGGTTGGT 47603 Query 9248 CGCGGCGATGACAA-CAATACCTGTTTCATTATCAAAACCATCCATCTCTGTCAAAAGTT 9306 |||||| || | | || ||| || || ||||| || |||||||| || | | Sbjct 47604 CGCGGCAATCAGGATCACGCCCTCATTGCTT-TCAAACCCGTCCATCTCGACCAGCATCT 47662 Query 9307 GGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA---CCAGCACTGCGTTGCT 9363 |||| | || || || || ||||||||| | || |||| || || | || || Sbjct 47663 GGTTCAGCGTCTGCTCACGCTCATCATTCCC--GCC-ACCAAGGCCCGCGCCACGATGGC 47719 Query 9364 TTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGA---TTTTCGCGGGCGA 9420 |||||||| ||||| || |||||||||| || || || |||| || | Sbjct 47720 GGCCCACGGCGTCAATTTCGTCAATGAAGATGATGCACGGCGCGGCCTTTTTGC---CCT 47776 Query 9421 TTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTG 9480 || || | || || || | || || ||||| |||||||| |||||||||| | Sbjct 47777 GCTCGAACATGTCACGCACGCGGGACGCACCAACACCGACAAACATTTCCACAAAGTCAG 47836 Query 9481 CGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGA 9539 ||||| || | || ||| || ||||| | |||||||||||||| || || || || Sbjct 47837 ACCCGGAA-ATGGTGAAGAACGGCACATTGGCCTCACCCGCAATGGCACGCGCCAGCAGG 47895 Query 9540 GTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCCACTT 9599 ||||||||||| || || || | || ||| | ||| || || || ||||| Sbjct 47896 GTCTTACCCGTGCCCGGAGGCCCGACCAGAAGGACGCCCTTGGGGATTTT---GCCAC-- 47950 Query 9600 CCAAA---GT--ATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTT 9654 ||| | || || ||| || | || || || || ||||| || | | ||| | | Sbjct 47951 CCAGACGGGTAAATTTCTGCGGGTCTTTCAGGAAGTCGACAATTTCCTGAAGCTCACCCT 48010 Query 9655 TGGCGGCGTCAATCCCCTCAACATC 9679 |||| | ||||||||| ||||||| Sbjct 48011 TGGCTTCATCAATCCCCGCAACATC 48035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589786445574960