Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq20062 105 8e-18 >seq20062 Length=91454 Score = 105 bits (116), Expect = 8e-18 Identities = 175/248 (71%), Gaps = 6/248 (2%) Strand=Plus/Minus Query 159535 GAACTGTCATGTATTATGATTACATATCCATCTACACATGGT-GTATTTGAAACAAACAT 159593 ||| | || ||| | |||||||| || ||||| || ||||| || || ||| | | | Sbjct 73111 GAATTATCGTGTTTGATGATTACGTACCCATCCAC-CATGGGCGTGTTCGAAGAGACCGT 73053 Query 159594 --CAGACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCA 159651 | |||| | || | | || |||| ||||||||||||| ||| | || ||||| Sbjct 73052 TGCGGACA--TCTGCGCGTTGGTCCATGCTCATGGTGGTCAGGTCTATTTAGACGGTGCT 72995 Query 159652 AATCTAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCAT 159711 ||| | ||||| || || ||||| |||| ||||||| ||| ||||| | ||| Sbjct 72994 AATATGAATGCTCAAGTGGGTCTGTGCCGACCAGGTGACTACGGTAGCGATGTGTCACAT 72935 Query 159712 CTAAACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCT 159771 || || |||||||||| ||||| ||||||||||| || || || || ||| | || || Sbjct 72934 CTGAATCTACATAAGACCTTCTGCATTCCACATGGCGGCGGCGGCCCCGGCATGGGCCCC 72875 Query 159772 ATTGGTGT 159779 || || || Sbjct 72874 ATCGGAGT 72867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587857481233440