Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq7529 104 4e-17 >seq7529 Length=472152 Score = 104 bits (114), Expect = 4e-17 Identities = 182/265 (69%), Gaps = 0/265 (0%) Strand=Plus/Minus Query 113838 CTGAAGATAGGCGTGGAAGCCCAGCAGGCCCAGGCCGACCGAACGCTCCTGCGTAGCCGA 113897 ||| || ||| ||| ||||||| | ||| || || || |||||||| | | ||||| Sbjct 163051 CTGCAGGAAGGAGTGAAAGCCCATGACGCCTAGCCCAACTGAACGCTCGCGGGAAGCCGC 162992 Query 113898 GTAGATCGCGTAGGCCAACGCCGGCGGAGCGTTGTCGATGAACACCTGGAGGCAGTTGTC 113957 ||| ||| | || | ||||| ||| ||| || || |||| | |||||| Sbjct 162991 ATAGGCCGCCTTCTTCATTTCTGGCGGTGCGCGGTCAATAAAGTCCTGCAACACGTTGTC 162932 Query 113958 CAGCATACGCATCAGGTCTTCGATGAAGTGTGGGTCATCGACCCACTCGTCGAACTTCTC 114017 ||| | |||||| |||||| || || || || | ||| ||||| ||| || |||| Sbjct 162931 CAGAAAGAGCATCACGTCTTCAATAAACTGCGGCTTGTCGTGCCACTGGTCCCACGTCTC 162872 Query 114018 GGCGTTGACGCTCGACAGGCAGCAGACCGCCGTACGCTTCTTGCCTTGATCATCGCGCCC 114077 |||| | ||||||||||| || ||||| |||| |||||| |||| || || Sbjct 162871 AAGATTGAGGGAGGACAGGCAGCACACAGCCGTCCGCTGCTTGCCGTGATGGTCAATTCC 162812 Query 114078 GGTCGCCAGCGTGATCTCGGTGCAG 114102 ||||| |||||| || || | |||| Sbjct 162811 GGTCGGCAGCGTAATTTCCGAGCAG 162787 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895471312153680