Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_019917.1 Length=62952 Score E Sequences producing significant alignments: (Bits) Value seq8111 86.0 3e-12 >seq8111 Length=8821 Score = 86.0 bits (94), Expect = 3e-12 Identities = 172/251 (69%), Gaps = 8/251 (3%) Strand=Plus/Minus Query 54867 AGTTCCGCAAACTCGACTTCGCGACGCAGCAGGGCAACATCAAGGGCATCGACCCGGCCG 54926 ||||||||||||| |||| ||| | ||| | | | ||||| ||||||||| || Sbjct 5659 AGTTCCGCAAACTGTCTTTCGGCACGAACCAGTCCGATCTGAAGGGGATCGACCCGAACG 5600 Query 54927 GCTCGCAACGCGCGATGGACCTGTTCATGAAGGCGCAGTACCTGCGCTCGAAG---AAGC 54983 || || ||||| ||| |||||| |||| ||| ||||| | | ||| || | Sbjct 5599 GCAGCCAGCGCGCCTGGGATCTGTTCGTGAAAACGCGCTACCT---CGCAAAGCGTAATC 5543 Query 54984 CGGGCCGCGCGCTCGTCGCCGCGTCGGGCACGCCGATCACGAACACGATGGGCGAGCTGT 55043 | | |||| ||| || ||||| ||| ||||||| || ||||| |||||||| ||| Sbjct 5542 CCGAGCGCGTGCTGGTGATGGCGTCAGGCTCGCCGATTACCAACACCCTGGGCGAGATGT 5483 Query 55044 TCACGGTGCAACGCTTCTTCCAGC-CCGAGCAGATGGCCGAGGACGGTCTGGACACCTTC 55102 || || | || || ||| | | | | ||| | | | |||| |||||| || ||| Sbjct 5482 TCTCGATCCAGCGGTTCATGGATCTGCCAGC-GCTTGTCGAGCGTGGTCTGCACGAGTTC 5424 Query 55103 GACGCGTGGGC 55113 ||||| ||||| Sbjct 5423 GACGCCTGGGC 5413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201256937641122