Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq25128 95.1 6e-15 >seq25128 Length=30855 Score = 95.1 bits (104), Expect = 6e-15 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 25930 CTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTC 25989 || |||||| | ||| || ||||||| || || || | ||| | ||||| ||||| Sbjct 18955 CTTCATAAACAGATCGGGTATCCACAAGGCGTAGAAGAGATCACGAGCTCTGTGCTCTTC 18896 Query 25990 TTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTA 26048 || || ||| |||||||| || || ||||| ||||| ||||| || ||||| ||||| | Sbjct 18895 CTTGCCCGTG-TTCTTTTTGAGGTCCAAGAACTCAAAGATATCGGAATGCCAAGGTTCCA 18837 Query 26049 AATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTT 26108 || || |||||| ||| | || || ||||||||||| || || | || | Sbjct 18836 GGTAAATGGCAAAAGCGCCTGGCCGCTTGCCGCCACCTTGATCGACATAACGAGCCACAT 18777 Query 26109 CATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGC 26159 ||| || ||| | | ||| || || || ||| ||||| || || |||| Sbjct 18776 TATTAAACACTCTGAGCATGGGCACCAAACCATTTGAAGTGCCATTAGTGC 18726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252958726240550