Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq20062 111 2e-19 >seq20062 Length=91454 Score = 111 bits (122), Expect = 2e-19 Identities = 176/248 (71%), Gaps = 6/248 (2%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || || || || || | ||| || || || || ||||||||||| ||||| ||||||||| Sbjct 72867 ACTCCGATGGGGCCCATGCCGGGGCCGCCGCCGCCATGTGGAATGCAGAAGGTCTTATGT 72926 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | ||| ||||| | ||||| ||| ||||||| |||| ||||| || || ||| Sbjct 72927 AGATTCAGATGTGACACATCGCTACCGTAGTCACCTGGTCGGCACAGACCCACTTGAGCA 72986 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACGATCTTACATATC 138362 || | ||| ||||| || | ||| ||||||||||||| |||| || | | || | Sbjct 72987 TTCATATTAGCACCGTCTAAATAGACCTGACCACCATGAGCATGGACCAACGCGCAGA-- 73044 Query 138363 TGTCTG--ATGTTTGTTTCAAATAC-ACCATGAGTCGATGGATATGTAATCATAATACAT 138419 |||| | | | | ||| || || ||||| || ||||| || |||||||| | ||| Sbjct 73045 TGTCCGCAACGGTCTCTTCGAACACGCCCATG-GTGGATGGGTACGTAATCATCAAACAC 73103 Query 138420 GAGAGTTC 138427 || | ||| Sbjct 73104 GATAATTC 73111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578807663452080