Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_020853.1 Length=56958 Score E Sequences producing significant alignments: (Bits) Value seq6463 127 7e-25 seq15738 89.7 2e-13 seq7786 89.7 2e-13 >seq6463 Length=6456 Score = 127 bits (140), Expect = 7e-25 Identities = 209/296 (71%), Gaps = 8/296 (3%) Strand=Plus/Plus Query 44719 TGGGATGTAGAACTCACCCGG--CATGATCGAATAGCGGGCTGAGTATTCATTCACGTTG 44776 ||| | ||||||||| |||| || || |||||||| || || ||||| ||||| | Sbjct 4280 TGGAAGGTAGAACTC--CCGGTCCAGAATAGAATAGCGTGCCGAATATTCGTTCACACTC 4337 Query 44777 GCCGTCCGGTGACGGATCCATTGGCGGGCCACAAACACGGGCAGTTTGACATGAAGTTTG 44836 ||| | |||||||| ||||| || || || || ||||||||||| || || |||| ||| Sbjct 4338 GCCATACGGTGACGAATCCACTGCCGCGCGACGAACACGGGCAGCTTTACGTGAAACTTG 4397 Query 44837 ATCTCACAACCCTCAAACGGGCTGGTGTGCCAATGGCGCATAAGGTAGCGGATTAGGTCG 44896 ||||| || ||| ||||| | | || | || ||||| || |||||||| | | | Sbjct 4398 ATCTCGCACATCTCGAACGGCGTCGAATGACGGTGACGCATCAGATAGCGGATCA-GACC 4456 Query 44897 CGGTCCTTGCTGACACC--CTTGGTGCCCTGACCGTAGGATACGCGGGCCATCTGGACGA 44954 || ||| | || ||| ||| || ||| | || ||||| ||||| || ||| |||| Sbjct 4457 CGCATCTT-CGGAGACCTTCTTCGTCCCCCGGCCATAGGACACGCGCGCAGCCTGCACGA 4515 Query 44955 TAGCGCCGTCCGTGCCCATGTAGTCGATTGGTCGGACAAAGCCATGATCTAGGACC 45010 ||||| || |||||| || |||| || | || |||||||| || ||| Sbjct 4516 CCGCGCCATCGTCGCCCATATAATCGACCACGCGCAGGAAACCATGATCCAGCACC 4571 >seq15738 Length=191853 Score = 89.7 bits (98), Expect = 2e-13 Identities = 133/185 (72%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 44376 GCGGGACCCATGATTTGCAGA--TGTCGGCTATCGCATCGGCATAGACACGGACCTCTTT 44433 |||| ||||||| | |||| | || || || || || ||||| || |||| || | Sbjct 9247 GCGGCACCCATGCAT-GCAGGATTTTCAGC-ATAGCTTCCGCATAAACCCGGATTTCATA 9190 Query 44434 CTGGGCATGTTCATCGGCCCGCAGGCGCAGGAAGTGGAAGAGGTTGTGTAGGTCAATCTT 44493 ||| ||||| || ||||||| ||| || || | |||||||| || |||||||| Sbjct 9189 CTGCGCATGCGGGTCCAGCCGCAGGGCCAGAAAATGCATCAGGTTGTGCAGATCAATCTT 9130 Query 44494 CCAATACCATTGGGTGTAGACATTGACCGGCAAGTTCATGCGGGCCAGTTCGCGGGCCAA 44553 ||| ||||| ||||| ||| || || | || ||| ||||| |||||||| || |||| Sbjct 9129 CCAGTACCACTGGGTATAGGTGTTCACGGTCAGGTTGATGCGCGCCAGTTCACGCGCCAG 9070 Query 44554 GCCGT 44558 |||| Sbjct 9069 ACCGT 9065 >seq7786 Length=1579 Score = 89.7 bits (98), Expect = 2e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 44405 ATCGCATCGGCATAGACACGGACCTCTTTCTGGGCATGTTCATCGGCCCGCAGGCGCAGG 44464 ||| | || |||||| | |||| || | ||| || || || ||||||| ||| Sbjct 176 ATCACTTCCGCATAGGCGCGGATTTCGTACTGCGCGTGCGGGTCAAGCCGCAGGGCAAGG 117 Query 44465 AAGTGGAAGAGGTTGTGTAGGTCAATCTTCCAATACCATTGGGTGTAGACATTGACCGGC 44524 ||||| | ||||| || || ||||||||||| |||||||| |||||| || | || | Sbjct 116 AAGTGCATCAGGTTATGCAGATCAATCTTCCAGTACCATTGCGTGTAGGTGTTCAGCGTC 57 Query 44525 AAGTTCATGCGGGCCAGTTCGCGGGCCAAGCCGT 44558 | ||| || ||||||||||| || |||| |||| Sbjct 56 AGGTTGATACGGGCCAGTTCACGCGCCAGACCGT 23 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182086997352160