Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_021298.1 Length=51252 Score E Sequences producing significant alignments: (Bits) Value seq4621 104 8e-18 >seq4621 Length=3921 Score = 104 bits (114), Expect = 8e-18 Identities = 174/247 (70%), Gaps = 6/247 (2%) Strand=Plus/Plus Query 40474 GGATCACCTCGCCACGACG--CCGGTCATCGAAGTCGATGTCGACATCGGGCATGGACAC 40531 |||||||||| | ||||| || | || ||| ||||| |||| ||| ||||||||||| Sbjct 505 GGATCACCTCATCGCGACGATCCTGACA--GAAATCGATATCGAAATCCGGCATGGACAC 562 Query 40532 GCGCTCGGGGTTCAGGAACCGCTCGAAGATGAGTCCGTGCTCCAGCGGGTCGAGGTCGGT 40591 ||||||||||| || |||| ||||| | | ||| | | || || | || || Sbjct 563 ACGCTCGGGGTTTAGAAACCTTTCGAACAGCAATCCAAACGGAATGGGATCAATATCCGT 622 Query 40592 GATCCCGAGGACGTAGGCGACCAGCGAACCGGCCGCAGAGCCTCGCCCAGGGCCGACCCA 40651 ||| || | ||||| || || || || || | || || || || ||||||||| Sbjct 623 AATCGTCAGCGCATAGGCAACAAGTGACCCTGCGCCTGACCCACGTCCCGGGCCGACCGG 682 Query 40652 GACGCCGTTCTCCTTCGCCCAGCGGATGAAGTCCGCGACGACGAGGAAGTACGACGGG-A 40710 | | ||| | | |||||||| | || ||||| || |||| |||||||| | |||| | Sbjct 683 AATGTCGTGCGCTTTCGCCCACTGAATAAAGTCGGCAACGATCAGGAAGTA-GCCGGGAA 741 Query 40711 AGCCCAT 40717 ||||||| Sbjct 742 AGCCCAT 748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163833511637272