Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq17337 141 8e-29 seq13303 141 8e-29 seq24486 91.5 1e-13 >seq17337 Length=177336 Score = 141 bits (156), Expect = 8e-29 Identities = 158/209 (76%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 34437 ATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGG 34496 ||||| |||||| || || |||| ||||| || |||||||| ||||| || ||||||| Sbjct 59040 ATCGAACTGCGTCTGAGCACCCAATTCGCAACCAAAGTACTTGGTCGGATAGGTGGCCGG 59099 Query 34497 ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCC 34556 || || | || || | |||| ||||||||| | ||| ||||||||||| ||||| Sbjct 59100 GCGGCCGATAGCACGCGCCACCTCGGCCATGTTGACCAGGACGGTCTTGATGCCATTGCC 59159 Query 34557 CTTTCCTTCGACCTTGGC--GCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCC 34614 ||| || || |||||||| ||||| |||||||| |||||||| ||||| ||||| Sbjct 59160 CTTGCCCTCAACCTTGGCCTGCAGA--CGCGGCATCTTGTAGCGATAGAAGATGTCCGTA 59217 Query 34615 ACATTGCGGTTAACGTTCACAGTCCCCAT 34643 || |||| || || || || ||| |||| Sbjct 59218 ACGCTGCGATTCACATTGACGGTCGCCAT 59246 >seq13303 Length=10452 Score = 141 bits (156), Expect = 8e-29 Identities = 158/209 (76%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 34437 ATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGG 34496 ||||| |||||| || || |||| ||||| || |||||||| ||||| || ||||||| Sbjct 9438 ATCGAACTGCGTCTGAGCACCCAATTCGCAACCAAAGTACTTGGTCGGATAGGTGGCCGG 9497 Query 34497 ACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCC 34556 || || | || || | |||| ||||||||| | ||| ||||||||||| ||||| Sbjct 9498 GCGGCCGATAGCACGCGCCACCTCGGCCATGTTGACCAGGACGGTCTTGATGCCATTGCC 9557 Query 34557 CTTTCCTTCGACCTTGGC--GCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCC 34614 ||| || || |||||||| ||||| |||||||| |||||||| ||||| ||||| Sbjct 9558 CTTGCCCTCAACCTTGGCCTGCAGA--CGCGGCATCTTGTAGCGATAGAAGATGTCCGTA 9615 Query 34615 ACATTGCGGTTAACGTTCACAGTCCCCAT 34643 || |||| || || || || ||| |||| Sbjct 9616 ACGCTGCGATTCACATTGACGGTCGCCAT 9644 >seq24486 Length=213816 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 ||||||||||| || || ||||| || || ||||| ||||| ||| | || |||||| Sbjct 88142 AAAATGCAAATCTTCGTGAAAACCTTGACTGGCAAGACCATCACCTTGGAGGTGGAGCCC 88201 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 || || ||| | || || ||||| ||||| || || | ||| ||| Sbjct 88202 TCTGACACCATCGAGAATGTCAAGGCTAAGATCCAGGACAAGGAGGGAATTCCCCCAGAT 88261 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 ||||| | || || | || || || ||||||||||||| | | || || | || ||| Sbjct 88262 CAACAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAGGATGGCCGCACTCTGTCCGACTAC 88321 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || || || || || |||||| ||||| | | ||||| || || Sbjct 88322 AACATCCAGAAGGAGTCGACCTTGCACTTGGTGCTGCGTCTGCGTGGTGG 88371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412708999664522