Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq13822 93.3 3e-14 >seq13822 Length=124548 Score = 93.3 bits (102), Expect = 3e-14 Identities = 197/289 (68%), Gaps = 9/289 (3%) Strand=Plus/Minus Query 95568 GCAGGAATAACCCGTCACCCATTCCCATGAGCTGCTCGGCTCCACCCTCGTCCAGGATCA 95627 ||| ||| | | ||||||| ||| | |||||||||||| || ||| |||| || Sbjct 18969 GCATGAACAGCATGTCACCCTGTCCGAGGAGCTGCTCGGCGCCCTGCTCACCCAGAATGG 18910 Query 95628 CCCGGCTATCGG--TGAGTGATGCTGTGGCGAACGAGAGCCTAGACGGCACGTTGGATTT 95685 ||||| ||| | |||| ||| || || | || | ||| | ||||| ||| Sbjct 18909 TGCGGCTGTCGAACTTGCTGATCACCTGG--AAGGAAATCCGGGTCGGGAAGTTGGCTTT 18852 Query 95686 GATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATGCC 95745 || ||| || | ||| ||||||||||| ||||| || |||| ||| | ||| ||||| Sbjct 18851 AATGGTGCCGGTAATTACGTCCACGGAGGGGCGCTGTGTGGCCATGACCACATGGATGCC 18792 Query 95746 GGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGACTTCTTTCTTG-TAGC 95804 || || || ||||||||||| | || | | ||| || | ||| |||| || Sbjct 18791 CGCAGCACGGGCCTTCTGGGCCAGACGCTGTACGCAGGCGTCAATTTC---CTTGCCTGC 18735 Query 95805 CGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGATGTAGGG 95853 || |||||| || || |||| |||||||| | || ||||| ||||| Sbjct 18734 CG-TCATCATCAGATCGGCCACCTCGTCGATAATCACGACGATATAGGG 18687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351634222536674