Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq17665 109 9e-18 seq13053 109 9e-18 seq1005 100 5e-15 seq25128 96.9 5e-14 seq20201 89.7 8e-12 seq8364 89.7 8e-12 >seq17665 Length=18468 Score = 109 bits (120), Expect = 9e-18 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 2035625 CACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTT 2035684 ||| || ||||| |||||| | || |||||||| | ||||||||| | || || | Sbjct 14062 CACTCTATTTGAATTGATCTTGGCTGCCAACTATTTGGACATCAAGGGATTGCTGGAGCT 14003 Query 2035685 GGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGAC 2035744 ||||||||| ||||||||| | |||||||||||| | || ||||| || |||||||| Sbjct 14002 AACGTGCAAGACTGTGGCCAACATGATCAAGGGCAAGACTCCGGAGGATATACGCAAGAC 13943 Query 2035745 CTTTAACATCAAG 2035757 |||||||||||| Sbjct 13942 ATTTAACATCAAG 13930 >seq13053 Length=20672 Score = 109 bits (120), Expect = 9e-18 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 2035625 CACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTT 2035684 ||| || ||||| |||||| | || |||||||| | ||||||||| | || || | Sbjct 12483 CACTCTATTTGAATTGATCTTGGCTGCCAACTATTTGGACATCAAGGGATTGCTGGAGCT 12424 Query 2035685 GGGGTGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGAC 2035744 ||||||||| ||||||||| | |||||||||||| | || ||||| || |||||||| Sbjct 12423 AACGTGCAAGACTGTGGCCAACATGATCAAGGGCAAGACTCCGGAGGATATACGCAAGAC 12364 Query 2035745 CTTTAACATCAAG 2035757 |||||||||||| Sbjct 12363 ATTTAACATCAAG 12351 >seq1005 Length=48977 Score = 100 bits (110), Expect = 5e-15 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 429032 GTCGGGCAAGCCCACCAAGGGCGTCGTGGAGCGATTCAAGGGCAAGGAGGGCCGGATCCG 429091 ||||||||| ||| ||||| || || ||| |||||||||||||||| || || || Sbjct 11848 GTCGGGCAAACCCCTCAAGGCGATCAAGGCGCGTCTCAAGGGCAAGGAGGGTCGCATTCG 11907 Query 429092 CGGCAATTGCATGGGCAAGCGCGTCAACTTTACGGCGCGCGCCGTCATCAGTCCCGACCC 429151 || |||| |||||||| || ||| |||| | || || | ||||||| ||||| || Sbjct 11908 TGGTAATTTGATGGGCAAACGTGTCGACTTCTCCGCACGTACTGTCATCACACCCGATCC 11967 Query 429152 CGAAAT-CGACATTGACGAGGTGGGCGTGCCCTATGAGATCGTCAAGACGCTCACCTTTC 429210 | | | ||| || || ||||||||||||| | || | | | |||||||| | Sbjct 11968 CAATTTGCGA-ATCGATCAGGTGGGCGTGCCGCGTTCCATAGCACAAAATCTCACCTTCC 12026 Query 429211 CCGAGCGCGTGACGCCCTT 429229 |||||| || |||||||| Sbjct 12027 CCGAGCTGGTTACGCCCTT 12045 >seq25128 Length=30855 Score = 96.9 bits (106), Expect = 5e-14 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 2071860 CATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTT 2071919 ||||||||| ||| |||||| | |||| |||||||| || || | || ||| ||||| Sbjct 18952 CATAAACAGATCGGGTATCCACAAGGCGTAGAAGAGATCACGAGCTCTGTGCTCTTCCTT 18893 Query 2071920 GCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTA 2071979 ||| ||||||||| ||||| | | || | || |||| ||||| || |||||||| Sbjct 18892 GCCCGTGTTCTTTTTGAGGTCCAAGAACTCAAAGATATCGGAATGCCAAGGTTCCAGGTA 18833 Query 2071980 GCAGGCAAAGGCGCCCTTGCGCTTGCCGCCGCC 2072012 |||||| ||||| ||||||||||| || Sbjct 18832 AATGGCAAAAGCGCCTGGCCGCTTGCCGCCACC 18800 >seq20201 Length=249908 Score = 89.7 bits (98), Expect = 8e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 2411842 TTGTCGAGGTGGGCGTGCACGTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGA 2411901 || || || | ||| |||| |||||||| || || ||||| ||| || |||| ||| Sbjct 71947 TTATCCAGATAGGCATGCAGATCGGCAAACAGAATGGTCACCTCACAGCCAGCCTTGAGG 71888 Query 2411902 AAGTCGGCCAGTTTAAAGATGGGCACAAAGTAGCCCAGATGGGGCTTGCCCGTCGGCGCG 2411961 |||||||| | || | ||||||||||||||| | | ||| || |||||||| | || Sbjct 71887 AAGTCGGCAATCTTGGACATGGGCACAAAGTAGGCGACATGTGGTTTGCCCGTTGTTGCT 71828 Query 2411962 GTGCCCCAATAAAT 2411975 |||||||| || || Sbjct 71827 GTGCCCCAGTAGAT 71814 >seq8364 Length=11207 Score = 89.7 bits (98), Expect = 8e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 2411842 TTGTCGAGGTGGGCGTGCACGTCGGCAAAGAGGATCCTCACCCGACATCCGGCCTGGAGA 2411901 || || || | ||| |||| |||||||| || || ||||| ||| || |||| ||| Sbjct 6828 TTATCCAGATAGGCATGCAGATCGGCAAACAGAATGGTCACCTCACAGCCAGCCTTGAGG 6769 Query 2411902 AAGTCGGCCAGTTTAAAGATGGGCACAAAGTAGCCCAGATGGGGCTTGCCCGTCGGCGCG 2411961 |||||||| | || | ||||||||||||||| | | ||| || |||||||| | || Sbjct 6768 AAGTCGGCAATCTTGGACATGGGCACAAAGTAGGCGACATGTGGTTTGCCCGTTGTTGCT 6709 Query 2411962 GTGCCCCAATAAAT 2411975 |||||||| || || Sbjct 6708 GTGCCCCAGTAGAT 6695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7913443004819406