Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Drosophila_20albomicans_20[genbank_20GCA_5F000298335.1_202012-09-19] 26,354 sequences; 253,560,284 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq24486 113 3e-20 seq25099 98.7 6e-16 seq20348 89.7 3e-13 >seq24486 Length=213816 Score = 113 bits (124), Expect = 3e-20 Identities = 155/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 ||| |||| ||| | ||| ||||||||| ||||| ||||| || || |||| |||| Sbjct 88357 CAGCACCAAGTGCAAGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGAGTGCGGCCATC 88298 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| || ||||||||||| || || || ||| | || | ||||||||||| Sbjct 88297 CTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGTTGATCTGGGGGAATTCCCTCCTTGTC 88238 Query 34885 GTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATG 34942 | || || ||||| || || || | ||| || ||| || || | ||| ||| Sbjct 88237 CTGGATCTTAGCCTTGAC--ATTCTCGATGGTGTCAGAGGGCTCCACCTCCAAGGTGATG 88180 Query 34943 GTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 ||||| || || | ||| || || ||||| ||||| Sbjct 88179 GTCTTGCCAGTCAAGGTTTTCACGAAGATTTGCAT 88145 >seq25099 Length=83779 Score = 98.7 bits (108), Expect = 6e-16 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| ||| ||| |||||||||||||| || || ||| |||| |||| Sbjct 21206 AGGACCAAGTGAAGGGTCGACTCTTTCTGAATGTTATAATCAGAAAGGGTGCGACCATCC 21265 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| ||||| ||||||||||| || || ||||| ||| | || | || ||||| || Sbjct 21266 TCCAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGATCTGGAGGGATTCCTTCCTTATC 21324 >seq20348 Length=30608 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||| || || || || || || || || ||||| |||| |||| |||||| ||||| || Sbjct 12884 CTCTTTTTGGATATTGTAATCGGAAAGAGTGCGCCCATCTTCCAATTGCTTGCCGGCAAA 12825 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || || || ||| | || | || || ||||| | || || |||||| Sbjct 12824 GATCAAACGCTGTTGATCTGGAGGAATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATT 12765 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | | || | || | ||||| |||| || |||||||| ||||||||||| || || Sbjct 12764 TTCGATGGTATCCGACGGTTCGACCTCAAGAGTGATGGTCTTACCCGTGAGGGTTTTAAC 12705 Query 34966 AAAGATCTGCAT 34977 ||||| ||||| Sbjct 12704 GAAGATTTGCAT 12693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325588190933126